NAFlex. Nucleic Acids Flexibility

Nucleic Acid Analysis - Stiffness Analysis

(Using Curves+ program)

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Interactive Sequence (see Help)

Average Results

Results by Time

Stiffness by Helical Parameters

Stiffness By Base Pair Step

Shift

Slide

Rise

Tilt

Roll

Twist

[Image courtesy of Curves+]

Shift

Slide

Rise

Tilt

Roll

Twist

[Image courtesy of Curves+]

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	Shift	Slide	Rise	Tilt	Roll	Twist
Shift	1.107	0.000	0.000	-0.053	0.000	0.000
Slide	0.000	3.867	0.398	0.000	-0.121	-0.288
Rise	0.000	0.398	9.267	0.000	-0.023	-0.156
Tilt	-0.053	0.000	0.000	0.038	0.000	0.000
Roll	0.000	-0.121	-0.023	0.000	0.026	0.018
Twist	0.000	-0.288	-0.156	0.000	0.018	0.051

[Image courtesy of Curves+]

Units:
Diagonal Shift/Slide/Rise in kcal/(mol*Å²), Diagonal Tilt/Roll/Twist in kcal/(mol*degree²)
Out of Diagonal: Shift/Slide/Rise in kcal/(mol*Å), Out of Diagonal Tilt/Roll/Twist in kcal/(mol*degree)

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	Shift	Slide	Rise	Tilt	Roll	Twist
Shift	0.948	0.000	0.000	-0.148	0.000	0.000
Slide	0.000	7.019	0.058	0.000	-0.046	-0.522
Rise	0.000	0.058	11.263	0.000	0.025	-0.174
Tilt	-0.148	0.000	0.000	0.045	0.000	0.000
Roll	0.000	-0.046	0.025	0.000	0.026	0.008
Twist	0.000	-0.522	-0.174	0.000	0.008	0.089

[Image courtesy of Curves+]

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	Shift	Slide	Rise	Tilt	Roll	Twist
Shift	3.057	0.000	0.000	-0.068	0.000	0.000
Slide	0.000	8.264	2.380	0.000	-0.007	-0.401
Rise	0.000	2.380	15.727	0.000	0.146	-0.191
Tilt	-0.068	0.000	0.000	0.063	0.000	0.000
Roll	0.000	-0.007	0.146	0.000	0.051	0.008
Twist	0.000	-0.401	-0.191	0.000	0.008	0.104

[Image courtesy of Curves+]

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	Shift	Slide	Rise	Tilt	Roll	Twist
Shift	0.709	0.000	0.000	-0.094	0.000	0.000
Slide	0.000	2.461	1.042	0.000	0.030	-0.099
Rise	0.000	1.042	7.228	0.000	-0.046	-0.175
Tilt	-0.094	0.000	0.000	0.027	0.000	0.000
Roll	0.000	0.030	-0.046	0.000	0.015	0.007
Twist	0.000	-0.099	-0.175	0.000	0.007	0.024

[Image courtesy of Curves+]

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	Shift	Slide	Rise	Tilt	Roll	Twist
Shift	1.084	0.000	0.000	-0.109	0.000	0.000
Slide	0.000	2.817	2.629	0.000	0.071	-0.052
Rise	0.000	2.629	10.949	0.000	0.126	-0.210
Tilt	-0.109	0.000	0.000	0.042	0.000	0.000
Roll	0.000	0.071	0.126	0.000	0.022	0.005
Twist	0.000	-0.052	-0.210	0.000	0.005	0.030

[Image courtesy of Curves+]

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	Shift	Slide	Rise	Tilt	Roll	Twist
Shift	1.168	0.000	0.000	-0.127	0.000	0.000
Slide	0.000	3.170	2.535	0.000	0.057	-0.078
Rise	0.000	2.535	10.715	0.000	0.119	-0.213
Tilt	-0.127	0.000	0.000	0.041	0.000	0.000
Roll	0.000	0.057	0.119	0.000	0.027	0.008
Twist	0.000	-0.078	-0.213	0.000	0.008	0.033

[Image courtesy of Curves+]

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	Shift	Slide	Rise	Tilt	Roll	Twist
Shift	0.958	0.000	0.000	-0.048	0.000	0.000
Slide	0.000	1.862	0.973	0.000	0.000	-0.083
Rise	0.000	0.973	7.424	0.000	-0.071	-0.206
Tilt	-0.048	0.000	0.000	0.028	0.000	0.000
Roll	0.000	0.000	-0.071	0.000	0.016	0.011
Twist	0.000	-0.083	-0.206	0.000	0.011	0.030

[Image courtesy of Curves+]

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	Shift	Slide	Rise	Tilt	Roll	Twist
Shift	1.061	0.000	0.000	-0.178	0.000	0.000
Slide	0.000	8.575	0.731	0.000	-0.055	-0.560
Rise	0.000	0.731	10.631	0.000	0.030	-0.155
Tilt	-0.178	0.000	0.000	0.046	0.000	0.000
Roll	0.000	-0.055	0.030	0.000	0.026	0.002
Twist	0.000	-0.560	-0.155	0.000	0.002	0.105

[Image courtesy of Curves+]

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	Shift	Slide	Rise	Tilt	Roll	Twist
Shift	1.347	0.000	0.000	-0.019	0.000	0.000
Slide	0.000	3.656	1.023	0.000	-0.122	-0.258
Rise	0.000	1.023	8.626	0.000	-0.089	-0.128
Tilt	-0.019	0.000	0.000	0.041	0.000	0.000
Roll	0.000	-0.122	-0.089	0.000	0.034	0.015
Twist	0.000	-0.258	-0.128	0.000	0.015	0.057

[Image courtesy of Curves+]

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	Mean	Stdev
-aatt.4.cte	0.000	0.000

	Mean	Stdev
-aatt.5.cte	0.000	0.000

	Mean	Stdev
-atat.6.cte	0.000	0.000

	Mean	Stdev
-catg.3.cte	0.000	0.000

	Mean	Stdev
-gcgc.10.cte	0.000	0.000

	Mean	Stdev
-gcgc.2.cte	0.000	0.000

	Mean	Stdev
-tgca.9.cte	0.000	0.000

	Mean	Stdev
-ttaa.7.cte	0.000	0.000

	Mean	Stdev
-ttaa.8.cte	0.000	0.000

	Mean	Stdev
rise-10-GCGC	3.400	0.287

	Mean	Stdev
roll-10-GCGC	-1.780	5.678

	Mean	Stdev
shift-10-GCGC	0.000	0.855

	Mean	Stdev
slide-10-GCGC	-0.383	0.529

	Mean	Stdev
tilt-10-GCGC	0.000	4.347

	Mean	Stdev
twist-10-GCGC	33.604	5.039

	Mean	Stdev
rise-2-GCGC	3.355	0.282

	Mean	Stdev
roll-2-GCGC	-1.373	5.242

	Mean	Stdev
shift-2-GCGC	0.000	0.873

	Mean	Stdev
slide-2-GCGC	-0.252	0.487

	Mean	Stdev
tilt-2-GCGC	0.000	4.675

	Mean	Stdev
twist-2-GCGC	33.398	4.942

	Mean	Stdev
rise-3-CATG	3.325	0.315

	Mean	Stdev
roll-3-CATG	4.319	7.365

	Mean	Stdev
shift-3-CATG	0.000	1.235

	Mean	Stdev
slide-3-CATG	0.056	0.578

	Mean	Stdev
tilt-3-CATG	0.000	6.329

	Mean	Stdev
twist-3-CATG	36.316	6.529

	Mean	Stdev
rise-4-AATT	3.247	0.260

	Mean	Stdev
roll-4-AATT	4.652	5.485

	Mean	Stdev
shift-4-AATT	0.000	0.753

	Mean	Stdev
slide-4-AATT	-0.049	0.517

	Mean	Stdev
tilt-4-AATT	0.000	4.064

	Mean	Stdev
twist-4-AATT	31.507	4.946

	Mean	Stdev
rise-5-AATT	3.345	0.235

	Mean	Stdev
roll-5-AATT	-0.294	4.885

	Mean	Stdev
shift-5-AATT	0.000	1.123

	Mean	Stdev
slide-5-AATT	0.190	0.389

	Mean	Stdev
tilt-5-AATT	0.000	5.129

	Mean	Stdev
twist-5-AATT	39.772	3.553

	Mean	Stdev
rise-6-ATAT	3.225	0.201

	Mean	Stdev
roll-6-ATAT	-4.789	3.454

	Mean	Stdev
shift-6-ATAT	0.000	0.443

	Mean	Stdev
slide-6-ATAT	-0.721	0.299

	Mean	Stdev
tilt-6-ATAT	0.000	3.080

	Mean	Stdev
twist-6-ATAT	33.175	2.658

	Mean	Stdev
rise-7-TTAA	3.404	0.238

	Mean	Stdev
roll-7-TTAA	-1.941	4.837

	Mean	Stdev
shift-7-TTAA	0.000	1.251

	Mean	Stdev
slide-7-TTAA	0.134	0.326

	Mean	Stdev
tilt-7-TTAA	0.000	6.003

	Mean	Stdev
twist-7-TTAA	39.755	2.958

	Mean	Stdev
rise-8-TTAA	3.302	0.268

	Mean	Stdev
roll-8-TTAA	3.753	4.554

	Mean	Stdev
shift-8-TTAA	0.000	0.662

	Mean	Stdev
slide-8-TTAA	-0.420	0.495

	Mean	Stdev
tilt-8-TTAA	0.000	3.813

	Mean	Stdev
twist-8-TTAA	30.556	3.957

	Mean	Stdev
rise-9-TGCA	3.209	0.315

	Mean	Stdev
roll-9-TGCA	11.131	7.158

	Mean	Stdev
shift-9-TGCA	0.000	0.818

	Mean	Stdev
slide-9-TGCA	-0.072	0.618

	Mean	Stdev
tilt-9-TGCA	0.000	4.809

	Mean	Stdev
twist-9-TGCA	31.172	5.807

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