Nucleic Acid Analysis - Hydrogen Bond Analysis
Canonical Hydrogen Bond Distances
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3 |
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18 |
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5' |
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G |
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G |
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G |
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G |
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3' |
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3' |
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C |
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5' |
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36 |
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35 |
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34 |
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33 |
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32 |
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31 |
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30 |
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29 |
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28 |
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27 |
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26 |
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25 |
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Interactive Sequence (see Help)
| Mean | Stdev |
1_H1-36_N3-1 | 3.822 | 3.503 |
| Mean | Stdev |
1_H21-36_O2-1 | 3.893 | 3.671 |
| Mean | Stdev |
1_O6-36_H41-1 | 4.072 | 3.997 |
| Mean | Stdev |
10_H1-27_N3-10 | 1.966 | 0.099 |
| Mean | Stdev |
10_H21-27_O2-10 | 1.886 | 0.124 |
| Mean | Stdev |
10_O6-27_H41-10 | 1.971 | 0.180 |
| Mean | Stdev |
11_H1-26_N3-11 | 1.965 | 0.094 |
| Mean | Stdev |
11_H21-26_O2-11 | 1.920 | 0.137 |
| Mean | Stdev |
11_O6-26_H41-11 | 1.964 | 0.159 |
| Mean | Stdev |
12_H61-25_O4-12 | 2.041 | 0.208 |
| Mean | Stdev |
12_N1-25_H3-12 | 1.983 | 0.123 |
| Mean | Stdev |
13_H3-24_N1-13 | 1.984 | 0.124 |
| Mean | Stdev |
13_O4-24_H61-13 | 2.013 | 0.191 |
| Mean | Stdev |
14_H1-23_N3-14 | 1.967 | 0.094 |
| Mean | Stdev |
14_H21-23_O2-14 | 1.884 | 0.121 |
| Mean | Stdev |
14_O6-23_H41-14 | 1.972 | 0.167 |
| Mean | Stdev |
15_H1-22_N3-15 | 1.971 | 0.100 |
| Mean | Stdev |
15_H21-22_O2-15 | 1.926 | 0.142 |
| Mean | Stdev |
15_O6-22_H41-15 | 1.968 | 0.177 |
| Mean | Stdev |
16_H61-21_O4-16 | 2.042 | 0.226 |
| Mean | Stdev |
16_N1-21_H3-16 | 1.962 | 0.116 |
| Mean | Stdev |
17_H1-20_N3-17 | 2.033 | 0.762 |
| Mean | Stdev |
17_H21-20_O2-17 | 1.966 | 0.661 |
| Mean | Stdev |
17_O6-20_H41-17 | 2.042 | 0.971 |
| Mean | Stdev |
18_H41-19_O6-18 | 2.967 | 2.991 |
| Mean | Stdev |
18_N3-19_H1-18 | 2.723 | 2.452 |
| Mean | Stdev |
18_O2-19_H21-18 | 2.649 | 2.561 |
| Mean | Stdev |
2_H41-35_O6-2 | 1.985 | 0.221 |
| Mean | Stdev |
2_N3-35_H1-2 | 1.982 | 0.114 |
| Mean | Stdev |
2_O2-35_H21-2 | 1.901 | 0.128 |
| Mean | Stdev |
3_H1-34_N3-3 | 1.969 | 0.098 |
| Mean | Stdev |
3_H21-34_O2-3 | 1.885 | 0.120 |
| Mean | Stdev |
3_O6-34_H41-3 | 1.966 | 0.175 |
| Mean | Stdev |
4_H61-33_O4-4 | 2.013 | 0.205 |
| Mean | Stdev |
4_N1-33_H3-4 | 1.992 | 0.145 |
| Mean | Stdev |
5_H3-32_N1-5 | 1.987 | 0.175 |
| Mean | Stdev |
5_O4-32_H61-5 | 2.039 | 0.253 |
| Mean | Stdev |
6_H1-31_N3-6 | 1.961 | 0.094 |
| Mean | Stdev |
6_H21-31_O2-6 | 1.884 | 0.120 |
| Mean | Stdev |
6_O6-31_H41-6 | 1.968 | 0.179 |
| Mean | Stdev |
7_H1-30_N3-7 | 1.965 | 0.093 |
| Mean | Stdev |
7_H21-30_O2-7 | 1.919 | 0.139 |
| Mean | Stdev |
7_O6-30_H41-7 | 1.962 | 0.160 |
| Mean | Stdev |
8_H61-29_O4-8 | 2.037 | 0.209 |
| Mean | Stdev |
8_N1-29_H3-8 | 1.980 | 0.121 |
| Mean | Stdev |
9_H3-28_N1-9 | 1.986 | 0.139 |
| Mean | Stdev |
9_O4-28_H61-9 | 2.027 | 0.214 |
Nucleotide Number | Hydrogen Bond | Mean | Stdev |
1 | O6-H41_1-36 | 4.0719 | 3.9971 |
1 | H1-N3_1-36 | 3.8219 | 3.5028 |
1 | H21-O2_1-36 | 3.8927 | 3.6711 |
2 | H41-O6_2-35 | 1.9848 | 0.2211 |
2 | N3-H1_2-35 | 1.9821 | 0.1136 |
2 | O2-H21_2-35 | 1.9010 | 0.1284 |
3 | O6-H41_3-34 | 1.9657 | 0.1753 |
3 | H1-N3_3-34 | 1.9686 | 0.0980 |
3 | H21-O2_3-34 | 1.8851 | 0.1202 |
4 | N1-H3_4-33 | 1.9925 | 0.1453 |
4 | H61-O4_4-33 | 2.0129 | 0.2051 |
5 | H3-N1_5-32 | 1.9867 | 0.1753 |
5 | O4-H61_5-32 | 2.0389 | 0.2533 |
6 | O6-H41_6-31 | 1.9680 | 0.1789 |
6 | H1-N3_6-31 | 1.9612 | 0.0941 |
6 | H21-O2_6-31 | 1.8836 | 0.1203 |
7 | O6-H41_7-30 | 1.9616 | 0.1597 |
7 | H1-N3_7-30 | 1.9649 | 0.0931 |
7 | H21-O2_7-30 | 1.9191 | 0.1385 |
8 | N1-H3_8-29 | 1.9796 | 0.1209 |
8 | H61-O4_8-29 | 2.0366 | 0.2090 |
9 | H3-N1_9-28 | 1.9858 | 0.1388 |
9 | O4-H61_9-28 | 2.0266 | 0.2139 |
10 | O6-H41_10-27 | 1.9708 | 0.1798 |
10 | H1-N3_10-27 | 1.9660 | 0.0993 |
10 | H21-O2_10-27 | 1.8862 | 0.1236 |
11 | O6-H41_11-26 | 1.9638 | 0.1587 |
11 | H1-N3_11-26 | 1.9654 | 0.0944 |
11 | H21-O2_11-26 | 1.9201 | 0.1373 |
12 | N1-H3_12-25 | 1.9827 | 0.1227 |
12 | H61-O4_12-25 | 2.0411 | 0.2084 |
13 | H3-N1_13-24 | 1.9838 | 0.1241 |
13 | O4-H61_13-24 | 2.0131 | 0.1913 |
14 | O6-H41_14-23 | 1.9717 | 0.1670 |
14 | H1-N3_14-23 | 1.9670 | 0.0942 |
14 | H21-O2_14-23 | 1.8837 | 0.1212 |
15 | O6-H41_15-22 | 1.9681 | 0.1775 |
15 | H1-N3_15-22 | 1.9708 | 0.0998 |
15 | H21-O2_15-22 | 1.9263 | 0.1423 |
16 | N1-H3_16-21 | 1.9617 | 0.1161 |
16 | H61-O4_16-21 | 2.0420 | 0.2264 |
17 | O6-H41_17-20 | 2.0417 | 0.9706 |
17 | H1-N3_17-20 | 2.0327 | 0.7623 |
17 | H21-O2_17-20 | 1.9656 | 0.6609 |
18 | H41-O6_18-19 | 2.9673 | 2.9908 |
18 | N3-H1_18-19 | 2.7234 | 2.4517 |
18 | O2-H21_18-19 | 2.6493 | 2.5614 |