Nucleic Acid Analysis - Hydrogen Bond Analysis
Canonical Hydrogen Bond Distances
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1 |
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2 |
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3 |
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4 |
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5 |
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6 |
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7 |
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8 |
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9 |
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10 |
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11 |
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12 |
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13 |
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14 |
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15 |
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16 |
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5' |
C |
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G |
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T |
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C |
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T |
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A |
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C |
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T |
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A |
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G |
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C |
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G |
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A |
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G |
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G |
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C |
3' |
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x |
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3' |
G |
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C |
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A |
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G |
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A |
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T |
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G |
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A |
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T |
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C |
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G |
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C |
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T |
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C |
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C |
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5' |
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32 |
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31 |
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30 |
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29 |
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28 |
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27 |
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26 |
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25 |
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24 |
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23 |
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22 |
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21 |
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20 |
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19 |
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18 |
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17 |
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Interactive Sequence (see Help)
| Mean | Stdev |
1_H41-32_O6-1 | 2.464 | 1.528 |
| Mean | Stdev |
1_N3-32_H1-1 | 2.316 | 1.203 |
| Mean | Stdev |
1_O2-32_H21-1 | 2.228 | 1.090 |
| Mean | Stdev |
10_H1-23_N3-10 | 1.970 | 0.094 |
| Mean | Stdev |
10_H21-23_O2-10 | 1.906 | 0.129 |
| Mean | Stdev |
10_O6-23_H41-10 | 1.974 | 0.164 |
| Mean | Stdev |
11_H41-22_O6-11 | 1.946 | 0.147 |
| Mean | Stdev |
11_N3-22_H1-11 | 1.966 | 0.090 |
| Mean | Stdev |
11_O2-22_H21-11 | 1.905 | 0.130 |
| Mean | Stdev |
12_H1-21_N3-12 | 1.967 | 0.091 |
| Mean | Stdev |
12_H21-21_O2-12 | 1.874 | 0.116 |
| Mean | Stdev |
12_O6-21_H41-12 | 1.964 | 0.158 |
| Mean | Stdev |
13_H61-20_O4-13 | 1.974 | 0.182 |
| Mean | Stdev |
13_N1-20_H3-13 | 1.990 | 0.127 |
| Mean | Stdev |
14_H1-19_N3-14 | 1.953 | 0.089 |
| Mean | Stdev |
14_H21-19_O2-14 | 1.891 | 0.119 |
| Mean | Stdev |
14_O6-19_H41-14 | 1.969 | 0.158 |
| Mean | Stdev |
15_H1-18_N3-15 | 1.967 | 0.093 |
| Mean | Stdev |
15_H21-18_O2-15 | 1.901 | 0.125 |
| Mean | Stdev |
15_O6-18_H41-15 | 1.959 | 0.159 |
| Mean | Stdev |
16_H41-17_O6-16 | 2.020 | 0.441 |
| Mean | Stdev |
16_N3-17_H1-16 | 2.024 | 0.382 |
| Mean | Stdev |
16_O2-17_H21-16 | 1.942 | 0.411 |
| Mean | Stdev |
2_H1-31_N3-2 | 1.968 | 0.096 |
| Mean | Stdev |
2_H21-31_O2-2 | 1.889 | 0.125 |
| Mean | Stdev |
2_O6-31_H41-2 | 1.972 | 0.157 |
| Mean | Stdev |
3_H3-30_N1-3 | 1.999 | 0.135 |
| Mean | Stdev |
3_O4-30_H61-3 | 1.971 | 0.180 |
| Mean | Stdev |
4_H41-29_O6-4 | 1.976 | 0.161 |
| Mean | Stdev |
4_N3-29_H1-4 | 1.967 | 0.093 |
| Mean | Stdev |
4_O2-29_H21-4 | 1.917 | 0.134 |
| Mean | Stdev |
5_H3-28_N1-5 | 1.989 | 0.266 |
| Mean | Stdev |
5_O4-28_H61-5 | 2.048 | 0.383 |
| Mean | Stdev |
6_H61-27_O4-6 | 2.004 | 0.199 |
| Mean | Stdev |
6_N1-27_H3-6 | 1.971 | 0.128 |
| Mean | Stdev |
7_H41-26_O6-7 | 2.003 | 0.174 |
| Mean | Stdev |
7_N3-26_H1-7 | 1.979 | 0.102 |
| Mean | Stdev |
7_O2-26_H21-7 | 1.902 | 0.128 |
| Mean | Stdev |
8_H3-25_N1-8 | 1.965 | 0.176 |
| Mean | Stdev |
8_O4-25_H61-8 | 2.058 | 0.291 |
| Mean | Stdev |
9_H61-24_O4-9 | 2.008 | 0.211 |
| Mean | Stdev |
9_N1-24_H3-9 | 1.970 | 0.124 |
Nucleotide Number | Hydrogen Bond | Mean | Stdev |
1 | H41-O6_1-32 | 2.4639 | 1.5280 |
1 | N3-H1_1-32 | 2.3164 | 1.2032 |
1 | O2-H21_1-32 | 2.2277 | 1.0898 |
2 | O6-H41_2-31 | 1.9721 | 0.1570 |
2 | H1-N3_2-31 | 1.9685 | 0.0962 |
2 | H21-O2_2-31 | 1.8894 | 0.1250 |
3 | H3-N1_3-30 | 1.9993 | 0.1347 |
3 | O4-H61_3-30 | 1.9709 | 0.1802 |
4 | H41-O6_4-29 | 1.9758 | 0.1613 |
4 | N3-H1_4-29 | 1.9666 | 0.0929 |
4 | O2-H21_4-29 | 1.9173 | 0.1342 |
5 | H3-N1_5-28 | 1.9890 | 0.2657 |
5 | O4-H61_5-28 | 2.0484 | 0.3834 |
6 | N1-H3_6-27 | 1.9710 | 0.1275 |
6 | H61-O4_6-27 | 2.0044 | 0.1994 |
7 | H41-O6_7-26 | 2.0035 | 0.1745 |
7 | N3-H1_7-26 | 1.9788 | 0.1019 |
7 | O2-H21_7-26 | 1.9023 | 0.1283 |
8 | H3-N1_8-25 | 1.9651 | 0.1759 |
8 | O4-H61_8-25 | 2.0585 | 0.2915 |
9 | N1-H3_9-24 | 1.9701 | 0.1245 |
9 | H61-O4_9-24 | 2.0080 | 0.2110 |
10 | O6-H41_10-23 | 1.9736 | 0.1639 |
10 | H1-N3_10-23 | 1.9702 | 0.0942 |
10 | H21-O2_10-23 | 1.9062 | 0.1289 |
11 | H41-O6_11-22 | 1.9460 | 0.1472 |
11 | N3-H1_11-22 | 1.9664 | 0.0896 |
11 | O2-H21_11-22 | 1.9045 | 0.1298 |
12 | O6-H41_12-21 | 1.9641 | 0.1575 |
12 | H1-N3_12-21 | 1.9671 | 0.0914 |
12 | H21-O2_12-21 | 1.8742 | 0.1162 |
13 | N1-H3_13-20 | 1.9902 | 0.1268 |
13 | H61-O4_13-20 | 1.9737 | 0.1818 |
14 | O6-H41_14-19 | 1.9689 | 0.1575 |
14 | H1-N3_14-19 | 1.9530 | 0.0894 |
14 | H21-O2_14-19 | 1.8906 | 0.1192 |
15 | O6-H41_15-18 | 1.9587 | 0.1586 |
15 | H1-N3_15-18 | 1.9666 | 0.0934 |
15 | H21-O2_15-18 | 1.9013 | 0.1247 |
16 | H41-O6_16-17 | 2.0197 | 0.4414 |
16 | N3-H1_16-17 | 2.0241 | 0.3820 |
16 | O2-H21_16-17 | 1.9415 | 0.4107 |