Nucleic Acid Analysis - Hydrogen Bond Analysis
Canonical Hydrogen Bond Distances
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1 |
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2 |
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3 |
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4 |
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5 |
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8 |
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9 |
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10 |
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11 |
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12 |
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13 |
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14 |
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15 |
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16 |
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5' |
C |
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G |
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G |
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A |
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G |
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A |
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C |
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T |
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A |
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G |
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C |
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T |
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C |
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G |
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C |
3' |
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3' |
G |
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C |
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C |
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T |
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C |
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T |
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G |
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A |
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T |
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C |
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T |
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A |
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5' |
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32 |
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31 |
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30 |
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29 |
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28 |
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27 |
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26 |
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25 |
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24 |
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23 |
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22 |
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21 |
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20 |
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19 |
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18 |
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17 |
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Interactive Sequence (see Help)
| Mean | Stdev |
1_H41-32_O6-1 | 2.968 | 3.550 |
| Mean | Stdev |
1_N3-32_H1-1 | 2.736 | 2.771 |
| Mean | Stdev |
1_O2-32_H21-1 | 2.525 | 2.197 |
| Mean | Stdev |
10_H1-23_N3-10 | 1.968 | 0.092 |
| Mean | Stdev |
10_H21-23_O2-10 | 1.913 | 0.133 |
| Mean | Stdev |
10_O6-23_H41-10 | 1.982 | 0.164 |
| Mean | Stdev |
11_H61-22_O4-11 | 1.972 | 0.178 |
| Mean | Stdev |
11_N1-22_H3-11 | 1.992 | 0.128 |
| Mean | Stdev |
12_H41-21_O6-12 | 1.994 | 0.167 |
| Mean | Stdev |
12_N3-21_H1-12 | 1.961 | 0.094 |
| Mean | Stdev |
12_O2-21_H21-12 | 1.891 | 0.123 |
| Mean | Stdev |
13_H3-20_N1-13 | 1.968 | 0.118 |
| Mean | Stdev |
13_O4-20_H61-13 | 2.003 | 0.199 |
| Mean | Stdev |
14_H41-19_O6-14 | 1.969 | 0.189 |
| Mean | Stdev |
14_N3-19_H1-14 | 1.967 | 0.102 |
| Mean | Stdev |
14_O2-19_H21-14 | 1.879 | 0.117 |
| Mean | Stdev |
15_H1-18_N3-15 | 1.970 | 0.093 |
| Mean | Stdev |
15_H21-18_O2-15 | 1.896 | 0.125 |
| Mean | Stdev |
15_O6-18_H41-15 | 1.946 | 0.143 |
| Mean | Stdev |
16_H41-17_O6-16 | 1.977 | 0.198 |
| Mean | Stdev |
16_N3-17_H1-16 | 1.999 | 0.123 |
| Mean | Stdev |
16_O2-17_H21-16 | 1.927 | 0.165 |
| Mean | Stdev |
2_H1-31_N3-2 | 1.959 | 0.093 |
| Mean | Stdev |
2_H21-31_O2-2 | 1.898 | 0.128 |
| Mean | Stdev |
2_O6-31_H41-2 | 1.942 | 0.162 |
| Mean | Stdev |
3_H1-30_N3-3 | 1.974 | 0.095 |
| Mean | Stdev |
3_H21-30_O2-3 | 1.915 | 0.133 |
| Mean | Stdev |
3_O6-30_H41-3 | 1.955 | 0.149 |
| Mean | Stdev |
4_H61-29_O4-4 | 1.982 | 0.182 |
| Mean | Stdev |
4_N1-29_H3-4 | 1.983 | 0.123 |
| Mean | Stdev |
5_H1-28_N3-5 | 1.960 | 0.092 |
| Mean | Stdev |
5_H21-28_O2-5 | 1.915 | 0.133 |
| Mean | Stdev |
5_O6-28_H41-5 | 1.974 | 0.160 |
| Mean | Stdev |
6_H61-27_O4-6 | 1.973 | 0.177 |
| Mean | Stdev |
6_N1-27_H3-6 | 1.985 | 0.124 |
| Mean | Stdev |
7_H41-26_O6-7 | 2.025 | 0.186 |
| Mean | Stdev |
7_N3-26_H1-7 | 1.978 | 0.100 |
| Mean | Stdev |
7_O2-26_H21-7 | 1.903 | 0.129 |
| Mean | Stdev |
8_H3-25_N1-8 | 1.952 | 0.117 |
| Mean | Stdev |
8_O4-25_H61-8 | 2.101 | 0.287 |
| Mean | Stdev |
9_H61-24_O4-9 | 1.990 | 0.209 |
| Mean | Stdev |
9_N1-24_H3-9 | 1.994 | 0.139 |
Nucleotide Number | Hydrogen Bond | Mean | Stdev |
1 | H41-O6_1-32 | 2.9677 | 3.5501 |
1 | N3-H1_1-32 | 2.7361 | 2.7708 |
1 | O2-H21_1-32 | 2.5250 | 2.1968 |
2 | O6-H41_2-31 | 1.9420 | 0.1622 |
2 | H1-N3_2-31 | 1.9592 | 0.0934 |
2 | H21-O2_2-31 | 1.8982 | 0.1277 |
3 | O6-H41_3-30 | 1.9549 | 0.1490 |
3 | H1-N3_3-30 | 1.9735 | 0.0945 |
3 | H21-O2_3-30 | 1.9147 | 0.1333 |
4 | N1-H3_4-29 | 1.9829 | 0.1235 |
4 | H61-O4_4-29 | 1.9823 | 0.1822 |
5 | O6-H41_5-28 | 1.9744 | 0.1602 |
5 | H1-N3_5-28 | 1.9600 | 0.0917 |
5 | H21-O2_5-28 | 1.9150 | 0.1325 |
6 | N1-H3_6-27 | 1.9852 | 0.1237 |
6 | H61-O4_6-27 | 1.9729 | 0.1772 |
7 | H41-O6_7-26 | 2.0245 | 0.1861 |
7 | N3-H1_7-26 | 1.9775 | 0.1003 |
7 | O2-H21_7-26 | 1.9032 | 0.1291 |
8 | H3-N1_8-25 | 1.9515 | 0.1174 |
8 | O4-H61_8-25 | 2.1006 | 0.2868 |
9 | N1-H3_9-24 | 1.9941 | 0.1394 |
9 | H61-O4_9-24 | 1.9898 | 0.2089 |
10 | O6-H41_10-23 | 1.9820 | 0.1643 |
10 | H1-N3_10-23 | 1.9675 | 0.0918 |
10 | H21-O2_10-23 | 1.9132 | 0.1328 |
11 | N1-H3_11-22 | 1.9917 | 0.1275 |
11 | H61-O4_11-22 | 1.9717 | 0.1780 |
12 | H41-O6_12-21 | 1.9941 | 0.1669 |
12 | N3-H1_12-21 | 1.9609 | 0.0936 |
12 | O2-H21_12-21 | 1.8909 | 0.1227 |
13 | H3-N1_13-20 | 1.9682 | 0.1180 |
13 | O4-H61_13-20 | 2.0031 | 0.1988 |
14 | H41-O6_14-19 | 1.9686 | 0.1887 |
14 | N3-H1_14-19 | 1.9671 | 0.1015 |
14 | O2-H21_14-19 | 1.8785 | 0.1168 |
15 | O6-H41_15-18 | 1.9455 | 0.1428 |
15 | H1-N3_15-18 | 1.9701 | 0.0926 |
15 | H21-O2_15-18 | 1.8957 | 0.1246 |
16 | H41-O6_16-17 | 1.9769 | 0.1975 |
16 | N3-H1_16-17 | 1.9994 | 0.1230 |
16 | O2-H21_16-17 | 1.9265 | 0.1648 |