Nucleic Acid Analysis - Hydrogen Bond Analysis
Canonical Hydrogen Bond Distances
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1 |
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2 |
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3 |
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4 |
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5 |
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6 |
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7 |
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8 |
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9 |
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10 |
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11 |
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12 |
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5' |
C |
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G |
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C |
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G |
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T |
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X |
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G |
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A |
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C |
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G |
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C |
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G |
3' |
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x |
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x |
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x |
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x |
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x |
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x |
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3' |
G |
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C |
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G |
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C |
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A |
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G |
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X |
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T |
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G |
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C |
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G |
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C |
5' |
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24 |
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23 |
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22 |
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21 |
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20 |
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19 |
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18 |
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17 |
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16 |
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15 |
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14 |
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13 |
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Interactive Sequence (see Help)
| Mean | Stdev |
1_H41-24_O6-1 | 2.762 | 2.128 |
| Mean | Stdev |
1_N3-24_H1-1 | 2.680 | 2.005 |
| Mean | Stdev |
1_O2-24_H21-1 | 2.620 | 2.026 |
| Mean | Stdev |
10_H1-15_N3-10 | 1.965 | 0.091 |
| Mean | Stdev |
10_H21-15_O2-10 | 1.886 | 0.119 |
| Mean | Stdev |
10_O6-15_H41-10 | 1.949 | 0.146 |
| Mean | Stdev |
11_H41-14_O6-11 | 1.946 | 0.154 |
| Mean | Stdev |
11_N3-14_H1-11 | 1.962 | 0.091 |
| Mean | Stdev |
11_O2-14_H21-11 | 1.889 | 0.125 |
| Mean | Stdev |
12_H1-13_N3-12 | 2.018 | 0.410 |
| Mean | Stdev |
12_H21-13_O2-12 | 1.953 | 0.359 |
| Mean | Stdev |
12_O6-13_H41-12 | 2.075 | 0.600 |
| Mean | Stdev |
2_H1-23_N3-2 | 1.974 | 0.160 |
| Mean | Stdev |
2_H21-23_O2-2 | 1.891 | 0.125 |
| Mean | Stdev |
2_O6-23_H41-2 | 1.972 | 0.328 |
| Mean | Stdev |
3_H41-22_O6-3 | 1.951 | 0.146 |
| Mean | Stdev |
3_N3-22_H1-3 | 1.967 | 0.089 |
| Mean | Stdev |
3_O2-22_H21-3 | 1.888 | 0.120 |
| Mean | Stdev |
4_H1-21_N3-4 | 1.965 | 0.094 |
| Mean | Stdev |
4_H21-21_O2-4 | 1.889 | 0.124 |
| Mean | Stdev |
4_O6-21_H41-4 | 1.973 | 0.158 |
| Mean | Stdev |
5_H3-20_N1-5 | 2.004 | 0.132 |
| Mean | Stdev |
5_O4-20_H61-5 | 1.957 | 0.163 |
| Mean | Stdev |
8_H61-17_O4-8 | 1.952 | 0.164 |
| Mean | Stdev |
8_N1-17_H3-8 | 2.010 | 0.137 |
| Mean | Stdev |
9_H41-16_O6-9 | 1.975 | 0.159 |
| Mean | Stdev |
9_N3-16_H1-9 | 1.968 | 0.095 |
| Mean | Stdev |
9_O2-16_H21-9 | 1.885 | 0.120 |
Nucleotide Number | Hydrogen Bond | Mean | Stdev |
1 | H41-O6_1-24 | 2.7622 | 2.1278 |
1 | N3-H1_1-24 | 2.6798 | 2.0053 |
1 | O2-H21_1-24 | 2.6196 | 2.0262 |
2 | O6-H41_2-23 | 1.9715 | 0.3280 |
2 | H1-N3_2-23 | 1.9742 | 0.1596 |
2 | H21-O2_2-23 | 1.8905 | 0.1249 |
3 | H41-O6_3-22 | 1.9508 | 0.1465 |
3 | N3-H1_3-22 | 1.9668 | 0.0895 |
3 | O2-H21_3-22 | 1.8877 | 0.1204 |
4 | O6-H41_4-21 | 1.9733 | 0.1575 |
4 | H1-N3_4-21 | 1.9650 | 0.0942 |
4 | H21-O2_4-21 | 1.8894 | 0.1244 |
5 | H3-N1_5-20 | 2.0038 | 0.1323 |
5 | O4-H61_5-20 | 1.9571 | 0.1626 |
8 | N1-H3_8-17 | 2.0097 | 0.1367 |
8 | H61-O4_8-17 | 1.9520 | 0.1639 |
9 | H41-O6_9-16 | 1.9751 | 0.1592 |
9 | N3-H1_9-16 | 1.9680 | 0.0949 |
9 | O2-H21_9-16 | 1.8853 | 0.1205 |
10 | O6-H41_10-15 | 1.9494 | 0.1464 |
10 | H1-N3_10-15 | 1.9653 | 0.0908 |
10 | H21-O2_10-15 | 1.8858 | 0.1194 |
11 | H41-O6_11-14 | 1.9460 | 0.1543 |
11 | N3-H1_11-14 | 1.9619 | 0.0911 |
11 | O2-H21_11-14 | 1.8889 | 0.1248 |
12 | O6-H41_12-13 | 2.0752 | 0.6000 |
12 | H1-N3_12-13 | 2.0177 | 0.4099 |
12 | H21-O2_12-13 | 1.9534 | 0.3591 |