Nucleic Acid Analysis - Hydrogen Bond Analysis
Canonical Hydrogen Bond Distances
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1 |
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2 |
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3 |
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4 |
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5 |
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6 |
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7 |
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8 |
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9 |
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10 |
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11 |
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12 |
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13 |
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14 |
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15 |
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16 |
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17 |
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18 |
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5' |
G |
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C |
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T |
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A |
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C |
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G |
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C |
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G |
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G |
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A |
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C |
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G |
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A |
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G |
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A |
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G |
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C |
3' |
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3' |
C |
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G |
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A |
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T |
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G |
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C |
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G |
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C |
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C |
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T |
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A |
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G |
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5' |
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36 |
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35 |
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34 |
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33 |
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32 |
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31 |
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30 |
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29 |
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28 |
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27 |
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26 |
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25 |
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24 |
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23 |
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22 |
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21 |
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20 |
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19 |
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Interactive Sequence (see Help)
| Mean | Stdev |
1_H1-36_N3-1 | 1.998 | 0.124 |
| Mean | Stdev |
1_H21-36_O2-1 | 1.924 | 0.155 |
| Mean | Stdev |
1_O6-36_H41-1 | 1.992 | 0.212 |
| Mean | Stdev |
10_H61-27_O4-10 | 2.008 | 0.200 |
| Mean | Stdev |
10_N1-27_H3-10 | 1.981 | 0.123 |
| Mean | Stdev |
11_H3-26_N1-11 | 1.996 | 0.127 |
| Mean | Stdev |
11_O4-26_H61-11 | 1.992 | 0.181 |
| Mean | Stdev |
12_H41-25_O6-12 | 1.962 | 0.158 |
| Mean | Stdev |
12_N3-25_H1-12 | 1.968 | 0.093 |
| Mean | Stdev |
12_O2-25_H21-12 | 1.897 | 0.130 |
| Mean | Stdev |
13_H1-24_N3-13 | 1.969 | 0.093 |
| Mean | Stdev |
13_H21-24_O2-13 | 1.887 | 0.123 |
| Mean | Stdev |
13_O6-24_H41-13 | 1.957 | 0.153 |
| Mean | Stdev |
14_H61-23_O4-14 | 1.968 | 0.176 |
| Mean | Stdev |
14_N1-23_H3-14 | 1.995 | 0.133 |
| Mean | Stdev |
15_H1-22_N3-15 | 1.966 | 0.095 |
| Mean | Stdev |
15_H21-22_O2-15 | 1.905 | 0.130 |
| Mean | Stdev |
15_O6-22_H41-15 | 1.977 | 0.165 |
| Mean | Stdev |
16_H61-21_O4-16 | 1.999 | 0.193 |
| Mean | Stdev |
16_N1-21_H3-16 | 1.970 | 0.118 |
| Mean | Stdev |
17_H1-20_N3-17 | 1.961 | 0.094 |
| Mean | Stdev |
17_H21-20_O2-17 | 1.895 | 0.126 |
| Mean | Stdev |
17_O6-20_H41-17 | 1.970 | 0.162 |
| Mean | Stdev |
18_H41-19_O6-18 | 2.022 | 0.363 |
| Mean | Stdev |
18_N3-19_H1-18 | 2.023 | 0.286 |
| Mean | Stdev |
18_O2-19_H21-18 | 1.948 | 0.462 |
| Mean | Stdev |
2_H41-35_O6-2 | 1.996 | 0.169 |
| Mean | Stdev |
2_N3-35_H1-2 | 1.975 | 0.097 |
| Mean | Stdev |
2_O2-35_H21-2 | 1.900 | 0.130 |
| Mean | Stdev |
3_H3-34_N1-3 | 1.954 | 0.111 |
| Mean | Stdev |
3_O4-34_H61-3 | 2.040 | 0.228 |
| Mean | Stdev |
4_H61-33_O4-4 | 1.968 | 0.177 |
| Mean | Stdev |
4_N1-33_H3-4 | 2.004 | 0.139 |
| Mean | Stdev |
5_H41-32_O6-5 | 1.978 | 0.161 |
| Mean | Stdev |
5_N3-32_H1-5 | 1.977 | 0.096 |
| Mean | Stdev |
5_O2-32_H21-5 | 1.891 | 0.126 |
| Mean | Stdev |
6_H1-31_N3-6 | 1.968 | 0.090 |
| Mean | Stdev |
6_H21-31_O2-6 | 1.896 | 0.120 |
| Mean | Stdev |
6_O6-31_H41-6 | 1.953 | 0.149 |
| Mean | Stdev |
7_H41-30_O6-7 | 1.950 | 0.150 |
| Mean | Stdev |
7_N3-30_H1-7 | 1.971 | 0.092 |
| Mean | Stdev |
7_O2-30_H21-7 | 1.899 | 0.124 |
| Mean | Stdev |
8_H1-29_N3-8 | 1.962 | 0.102 |
| Mean | Stdev |
8_H21-29_O2-8 | 1.879 | 0.121 |
| Mean | Stdev |
8_O6-29_H41-8 | 1.964 | 0.194 |
| Mean | Stdev |
9_H1-28_N3-9 | 1.969 | 0.094 |
| Mean | Stdev |
9_H21-28_O2-9 | 1.931 | 0.142 |
| Mean | Stdev |
9_O6-28_H41-9 | 1.971 | 0.166 |
Nucleotide Number | Hydrogen Bond | Mean | Stdev |
1 | O6-H41_1-36 | 1.9920 | 0.2120 |
1 | H1-N3_1-36 | 1.9980 | 0.1241 |
1 | H21-O2_1-36 | 1.9238 | 0.1554 |
2 | H41-O6_2-35 | 1.9955 | 0.1694 |
2 | N3-H1_2-35 | 1.9754 | 0.0969 |
2 | O2-H21_2-35 | 1.8997 | 0.1298 |
3 | H3-N1_3-34 | 1.9543 | 0.1111 |
3 | O4-H61_3-34 | 2.0403 | 0.2278 |
4 | N1-H3_4-33 | 2.0041 | 0.1386 |
4 | H61-O4_4-33 | 1.9678 | 0.1774 |
5 | H41-O6_5-32 | 1.9777 | 0.1611 |
5 | N3-H1_5-32 | 1.9767 | 0.0964 |
5 | O2-H21_5-32 | 1.8913 | 0.1255 |
6 | O6-H41_6-31 | 1.9526 | 0.1486 |
6 | H1-N3_6-31 | 1.9680 | 0.0900 |
6 | H21-O2_6-31 | 1.8957 | 0.1204 |
7 | H41-O6_7-30 | 1.9500 | 0.1503 |
7 | N3-H1_7-30 | 1.9709 | 0.0921 |
7 | O2-H21_7-30 | 1.8988 | 0.1240 |
8 | O6-H41_8-29 | 1.9645 | 0.1939 |
8 | H1-N3_8-29 | 1.9615 | 0.1022 |
8 | H21-O2_8-29 | 1.8788 | 0.1208 |
9 | O6-H41_9-28 | 1.9709 | 0.1664 |
9 | H1-N3_9-28 | 1.9686 | 0.0942 |
9 | H21-O2_9-28 | 1.9312 | 0.1418 |
10 | N1-H3_10-27 | 1.9813 | 0.1229 |
10 | H61-O4_10-27 | 2.0076 | 0.1995 |
11 | H3-N1_11-26 | 1.9959 | 0.1271 |
11 | O4-H61_11-26 | 1.9923 | 0.1813 |
12 | H41-O6_12-25 | 1.9620 | 0.1581 |
12 | N3-H1_12-25 | 1.9677 | 0.0932 |
12 | O2-H21_12-25 | 1.8966 | 0.1304 |
13 | O6-H41_13-24 | 1.9571 | 0.1531 |
13 | H1-N3_13-24 | 1.9690 | 0.0927 |
13 | H21-O2_13-24 | 1.8872 | 0.1228 |
14 | N1-H3_14-23 | 1.9953 | 0.1331 |
14 | H61-O4_14-23 | 1.9685 | 0.1765 |
15 | O6-H41_15-22 | 1.9768 | 0.1651 |
15 | H1-N3_15-22 | 1.9660 | 0.0945 |
15 | H21-O2_15-22 | 1.9053 | 0.1296 |
16 | N1-H3_16-21 | 1.9703 | 0.1179 |
16 | H61-O4_16-21 | 1.9990 | 0.1932 |
17 | O6-H41_17-20 | 1.9703 | 0.1624 |
17 | H1-N3_17-20 | 1.9606 | 0.0937 |
17 | H21-O2_17-20 | 1.8951 | 0.1264 |
18 | H41-O6_18-19 | 2.0219 | 0.3630 |
18 | N3-H1_18-19 | 2.0228 | 0.2856 |
18 | O2-H21_18-19 | 1.9485 | 0.4616 |