BIGNASim database structure and analysis portal for nucleic acids simulation data

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> Nucleic Acid Type
Any DNA (134) RNA (14) DNA-RNA Hybrid (1) Other
> Structure
Any Lineal (Single Strand) (0) Duplex (133) Triplex (4) Quadruplex (6) Holliday Junction (1) 3-Way Junction (1) RNA Pseudoknot (1) Ribozymes (1) Large Ribosomal RNA (0) Riboswitch (0) tRNA (0) G1introns (0) G2introns (0) RNA nanostructures (0) Other
> System Type
Any Naked (140) Complex: Protein-Nuc (6) Complex: LigandNuc (0) Other
> Trajectory Type
Any Equilibrium (144) Un/Folding (1) Transition (5) Other
> Original Helical Conformation
Any A (16) B (113) Z (3) Hoogsteen (2) Mixed (5) Other
> Sequence Modifications
Any Modified Nucleotides (5) Cross Linked (0) Epigenetic Variants (0) Other
> Sequence Features
Any Poly Adenine Track (2) Poly Guanine Track (0) Drew Dickerson Dodecamer (8) Sequence Mismatch (2) Other
> Local Structures
Any Kink Turn (0) Bulges (1) Internal Loops (4) Interacting Loops (1) Triloops (0) Tetraloops (0) Hexaloops (0) tRNAFragments (0) Sarcin-Ricin (1)
> Simulation Conditions