nucleR: a package for non-parametric nucleosome positioning.
| Title | nucleR: a package for non-parametric nucleosome positioning. |
| Publication Type | Journal Article |
| Year of Publication | 2011 |
| Authors | Flores, Oscar, and Orozco Modesto |
| Journal | Bioinformatics |
| Volume | 27 |
| Pagination | 2149-50 |
| Date Published | 2011 Aug 1 |
| ISSN | 1367-4811 |
| Keywords | Algorithms, Fourier Analysis, Genomics, Nucleosomes, Software |
| Abstract | SUMMARY: nucleR is an R/Bioconductor package for a flexible and fast recognition of nucleosome positioning from next generation sequencing and tiling arrays experiments. The software is integrated with standard high-throughput genomics R packages and allows for in situ visualization as well as to export results to common genome browser formats. AVAILABILITY: Additional information and methodological details can be found at https://mmb.pcb.ub.es/nucleR |
| DOI | 10.1093/bioinformatics/btr345 |