BIGNASim database structure and analysis portal for nucleic acids simulation data
BIGNASim Nucleotide MD Simulations DB Global Statistics
General Statistics
Total Number of Simulations / Time Simulated
566
396 µs
Dna
408
300,851 ns
Prot-Dna
30
46,300 ns
Rna
37
31,100 ns
Prot
89
16,000 ns
Prot-Rna
2
2,000 ns
Total Amount of disk used
0 TB (dry)
~ 0 TB (raw)
Simulations by Nucleic Acid Type
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Type
Number
Dna
408
Prot
89
Rna
37
Prot-Dna
30
Prot-Rna
2
Statistics by Bases / Base-Pairs / Base-Pair Steps
Nucleotide Bases Analized
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Type
Number
R
5885
Y
5576
G
3376
C
3245
A
2509
T
2331
Nucleotide Base-Pairs Analized
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Type
Number
R-Y/Y-R
5422
C-G/G-C
3162
A-T/T-A
2260
Nucleotide Base-Pair Steps Analized
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Type
Number
RR
1537
RY
1451
YR
1369
YY
836
GC
647
CG
548
AA
436
GG
418
GA
343
AG
340
TA
306
AT
301
AC
285
CA
277
CT
250
TG
238
GT
218
TC
218
CC
184
TT
184
Statistics by Ontology
Ontology: NA Types
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Type
Number
NA_Type
291
Architecture
17
Ontology: NA Structure Types
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Type
Number
TrajectoryType
411
SimConditions
2
Ontology: System Type
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Type
Number
TimeScope
388
Ontology: Trajectory Type
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Type
Number
415
Ontology: Helical Conformation
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Type
Number
394
Ontology: MD Force Field
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Type
Number
1
Ontology: MD Length
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Type
Number
170
Ontology: MD Charge
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Type
Number
166