Nucleosome Dynamics Help - Usage

Usage

How to run Nucleosome Dynamics

Nucleosome positioning plays a major role in transcriptional regulation DNA replication and DNA repair. The suite is written in R, yet, a number of other implementations have been prepared in order to reach also non-R users. These implementations include two web-based platforms (MuGVRE and Galaxy) and two containerized installations (docker and singularity).

Learn how to run Nucleosome Dynamics analyses in each of the offered distributions:

Code distribution
Standalone installation Nucleosome Dynamics CLI README
nucleR package README
Vignette
NuclDyn package README
Vignette
Containerized installation Docker README
Singularity README
Platforms in use
MuG Virtual Research Environment Tutorial
Galaxy Platform Tutorial