Methotrexate (MTX) Summary

Clusters summary
Clustering method gromos
Clustering metric RSMdi
Initial clustering cutoff (nm) 0.05
Final clustering cutoff (nm) 0.11
Number of clusters 23
Number of clusters representing 95% 8
Cluster Population
Clusters Convergence
ΔG WITH RESPECT TO BIOACTIVE CONFORMATION
ΔGdist (kcal/mol) 1.1719
ΔGstrain (kcal/mol) 0.0555
Conformations Table
ClNum ClPop ΔG Cl-Cl RMSd Exp
1 1518 0 1.7604
2 1498 0.0078 2.1677
3 1436 0.0328 1.9284
4 1382 0.0555 1.3948
5 1230 0.1245 2.439
6 1221 0.1289 2.59
7 852 0.3420 2.1037
8 406 0.7809 2.4216
Negative probe (charge -1)
Neutral probe (charge 0)
Positive probe (charge +1)
Negative probe (charge -1)
Neutral probe (charge 0)
Positive probe (charge +1)