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4-hydroxy-3-[2-oxo-3-(thieno[3,2-b]pyridine-2-sulfonylamino)-pyrrolidin-1-ylmethyl]-benzamidine (PR1) Summary
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4-hydroxy-3-[2-oxo-3-(thieno[3,2-b]pyridine-2-sulfonylamino)-pyrrolidin-1-ylmethyl]-benzamidine (PR1) Summary
Quantum Mechanics
Molecule
Trajectories
PCA
Clusters
Dihedrals
QM
QUANTUM MECHANICS
Energies
Distances
ΔG with respect to bioactive conformation
B3LYP level
ΔG
dist
(kcal/mol)
6.3678
ΔG
strain
(kcal/mol)
6.3232
M06 level
ΔG
dist
(kcal/mol)
2.1201
ΔG
strain
(kcal/mol)
1.8782
Conformations Table
Cluster
RMSd
RMSdvsMM
ΔG
B3LYP
ΔG
M06
1
2.7997
0.7664
4.2276
1.1263
2
2.6142
0.6178
0
0
3
2.7317
0.6289
4.8744
2.0997
4
2.1163
0.4141
1.8177
1.5598
5
2.024
0.5861
3.3751
2.1130
6
1.4867
1.2428
5.9956
4.2190
7
2.1507
1.5076
2.1519
0.9054
8
2.4101
0.7101
7.0350
4.3156
9
2.2409
0.6373
4.1116
2.8452
3D View
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Experimental Structure
Relaxed Structure
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Bioactive Conformational Ensemble Energies
CL vs CL
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CL vs CL
CL vs CL (internal distance)
CL vs CL (taking symmetries into account)
QM vs MM
QM vs MM (internal distance)
QM vs MM (taking symmetries into account)
3D View
Please first click on the left plot
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Cluster 1
Cluster 2
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