|
Id. |
PDB |
Type |
SubType |
ForceField |
Solvent |
Description |
Time (ns) |
Sequence |
|
NAFlex_2lpw |
2LPW |
Dna |
G-loop |
parmBSC1 |
TIP3P |
DNA Single Stranded Naked ParmBSC1 TIP3P Electroneutral G-Loop |
5,000 |
AAGGGTGGGTGTAAGTGTGGGTGGGT |
|
NAFlex_AT-rich_crowd_neut_500mM |
NONE |
Dna |
B |
parmBSC1 |
TIP3P |
DNA-B Duplex Naked TIP3P AddedSalt |
5,000 |
TGTATATTTTGTACAAAATATACATGTATATTTTGTACAAAATATACATGTATATTTTGTACAAAATATACATGTATATTTTGTACAAAATATACATGTATATTTTGTACAAAATATACATGTATATTTTGTACAAAATATACATGTATATTTTGTACAAAATATACATGTATATTTTGT |
|
NAFlex_AT-rich_crowd_Arg_500mM |
NONE |
Dna |
B |
parmBSC1 |
TIP3P |
DNA-B Duplex Naked TIP3P AddedSalt |
5,000 |
TGTATATTTTGTACAAAATATACATGTATATTTTGTACAAAATATACATGTATATTTTGTACAAAATATACATGTATATTTTGTACAAAATATACATGTATATTTTGTACAAAATATACATGTATATTTTGTACAAAATATACATGTATATTTTGTACAAAATATACATGTATATTTTGT |
|
NAFlex_GC-rich_crowd_Lys_500mM |
NONE |
Dna |
B |
parmBSC1 |
TIP3P |
DNA-B Duplex Naked TIP3P AddedSalt |
5,000 |
CACGCCCGGTGCGCACCGGGCGTGCACGCCCGGTGCGCACCGGGCGTGCACGCCCGGTGCGCACCGGGCGTGCACGCCCGGTGCGCACCGGGCGTGCACGCCCGGTGCGCACCGGGCGTGCACGCCCGGTGCGCACCGGGCGTGCACGCCCGGTGCGCACCGGGCGTGCACGCCCGGTGC |
|
NAFlex_GC-rich_crowd_Arg_500mM |
NONE |
Dna |
B |
parmBSC1 |
TIP3P |
DNA-B Duplex Naked TIP3P AddedSalt |
5,000 |
CACGCCCGGTGCGCACCGGGCGTGCACGCCCGGTGCGCACCGGGCGTGCACGCCCGGTGCGCACCGGGCGTGCACGCCCGGTGCGCACCGGGCGTGCACGCCCGGTGCGCACCGGGCGTGCACGCCCGGTGCGCACCGGGCGTGCACGCCCGGTGCGCACCGGGCGTGCACGCCCGGTGC |
|
NAFlex_GC-rich_crowd_neut_500mM |
NONE |
Dna |
B |
parmBSC1 |
TIP3P |
DNA-B Duplex Naked TIP3P AddedSalt |
5,000 |
CACGCCCGGTGCGCACCGGGCGTGCACGCCCGGTGCGCACCGGGCGTGCACGCCCGGTGCGCACCGGGCGTGCACGCCCGGTGCGCACCGGGCGTGCACGCCCGGTGCGCACCGGGCGTGCACGCCCGGTGCGCACCGGGCGTGCACGCCCGGTGCGCACCGGGCGTGCACGCCCGGTGC |
|
NAFlex_AT-rich_crowd_Na_500mM |
NONE |
Dna |
B |
parmBSC1 |
TIP3P |
DNA-B Duplex Naked TIP3P AddedSalt |
5,000 |
TGTATATTTTGTACAAAATATACATGTATATTTTGTACAAAATATACATGTATATTTTGTACAAAATATACATGTATATTTTGTACAAAATATACATGTATATTTTGTACAAAATATACATGTATATTTTGTACAAAATATACATGTATATTTTGTACAAAATATACATGTATATTTTGT |
|
NAFlex_GC-rich_crowd_Na_500mM |
NONE |
Dna |
B |
parmBSC1 |
TIP3P |
DNA-B Duplex Naked TIP3P AddedSalt |
5,000 |
CACGCCCGGTGCGCACCGGGCGTGCACGCCCGGTGCGCACCGGGCGTGCACGCCCGGTGCGCACCGGGCGTGCACGCCCGGTGCGCACCGGGCGTGCACGCCCGGTGCGCACCGGGCGTGCACGCCCGGTGCGCACCGGGCGTGCACGCCCGGTGCGCACCGGGCGTGCACGCCCGGTGC |
|
NAFlex_AT-rich_crowd_Lys_500mM |
NONE |
Dna |
B |
parmBSC1 |
TIP3P |
DNA-B Duplex Naked TIP3P AddedSalt |
5,000 |
TGTATATTTTGTACAAAATATACATGTATATTTTGTACAAAATATACATGTATATTTTGTACAAAATATACATGTATATTTTGTACAAAATATACATGTATATTTTGTACAAAATATACATGTATATTTTGTACAAAATATACATGTATATTTTGTACAAAATATACATGTATATTTTGT |
|
NAFlex_1anr |
1ANR |
Rna |
A |
parmBSC0 |
TIP3P |
RNA-A Single Stranded HIV-1 TAR Naked ParmBSC0 TIP3P Electroneutral internal-loops hairpin-loops |
4,939 |
GGCAGAUCUGAGCCUGGGAGCUCUCUGCC |
|
NAFlex_D05M |
1BNA |
Dna |
B |
parmBSC1 |
TIP3P |
DNA-B Duplex Naked ParmBSC1 TIP3P AddedSalt |
3,000 |
CGCGAATTCGCG |
|
NAFlex_DTipDang015M |
1BNA |
Dna |
B |
parmBSC1 |
TIP3P |
DNA-B Duplex Naked ParmBSC1 TIP3P AddedSalt |
2,000 |
CGCGAATTCGCG |
|
NAFlex_ProtDNA_1a66 |
1A66 |
Prot-Dna |
B |
parmBSC1 |
TIP3P |
DNA-B Duplex Naked ParmBSC1 TIP3P Electroneutral |
2,000 |
CAATTTTCCTCG |
|
NAFlex_ProtDNA_1c7u |
1C7U |
Prot-Dna |
B |
parmBSC1 |
TIP3P |
DNA-B Duplex Naked ParmBSC1 TIP3P Electroneutral |
2,000 |
CTCGGCTATTAATAGCCGAG |
|
NAFlex_ProtDNA_1cdw |
1CDW |
Prot-Dna |
B |
parmBSC1 |
TIP3P |
DNA-B Duplex Naked ParmBSC1 TIP3P Electroneutral |
2,000 |
CTGCTATAAAAGGCTG |
|
NAFlex_ProtDNA_1h9t |
1H9T |
Prot-Dna |
B |
parmBSC1 |
TIP3P |
DNA-B Duplex Naked ParmBSC1 TIP3P Electroneutral |
2,000 |
CATCTGGTACGACCAGATC |
|
NAFlex_ProtDNA_1hlv |
1HLV |
Prot-Dna |
B |
parmBSC1 |
TIP3P |
DNA-B Duplex Naked ParmBSC1 TIP3P Electroneutral |
2,000 |
AATCCCGTTTCCAACGAAGGC |
|
NAFlex_ProtDNA_1iv6 |
1IV6 |
Prot-Dna |
B |
parmBSC1 |
TIP3P |
DNA-B Duplex Naked ParmBSC1 TIP3P Electroneutral |
2,000 |
CCCTAACCCTAAC |
|
NAFlex_ProtDNA_1j46 |
1J46 |
Prot-Dna |
B |
parmBSC1 |
TIP3P |
DNA-B Duplex Naked ParmBSC1 TIP3P Electroneutral |
2,000 |
CCTGCACAAACACC |
|
NAFlex_ProtDNA_1j5n |
1J5N |
Prot-Dna |
B |
parmBSC1 |
TIP3P |
DNA-B Duplex Naked ParmBSC1 TIP3P Electroneutral |
2,000 |
CTGAACAATCACCCC |
|
NAFlex_ProtDNA_1je8 |
1JE8 |
Prot-Dna |
B |
parmBSC1 |
TIP3P |
DNA-B Duplex Naked ParmBSC1 TIP3P Electroneutral |
2,000 |
CGTACCCATTAATGGGTACG |
|
NAFlex_ProtDNA_1k6o |
1K6O |
Prot-Dna |
B |
parmBSC1 |
TIP3P |
DNA-B Duplex Naked ParmBSC1 TIP3P Electroneutral |
2,000 |
CACAGGATGTCCATATTAGGACA |
|
NAFlex_ProtDNA_1qn5 |
1QN5 |
Prot-Dna |
B |
parmBSC1 |
TIP3P |
DNA-B Duplex Naked ParmBSC1 TIP3P Electroneutral |
2,000 |
TGCCCTCTTATAGC |
|
NAFlex_ProtDNA_1r4i |
1R4I |
Prot-Dna |
B |
parmBSC1 |
TIP3P |
DNA-B Duplex Naked ParmBSC1 TIP3P Electroneutral |
2,000 |
CCAGAACATCAAGAACAG |
|
NAFlex_ProtDNA_1vtn |
1VTN |
Prot-Dna |
B |
parmBSC1 |
TIP3P |
DNA-B Duplex Naked ParmBSC1 TIP3P Electroneutral |
2,000 |
GACTAAGTCAACC |
|
NAFlex_ProtDNA_1yo5 |
1YO5 |
Prot-Dna |
B |
parmBSC1 |
TIP3P |
DNA-B Duplex Naked ParmBSC1 TIP3P Electroneutral |
2,000 |
ACACATCCTGCTA |
|
NAFlex_ProtDNA_1zgw |
1ZGW |
Prot-Dna |
B |
parmBSC1 |
TIP3P |
DNA-B Duplex Naked ParmBSC1 TIP3P Electroneutral |
2,000 |
GCAAATTAAAGCGCAAGA |
|
NAFlex_ProtDNA_2hdc |
2HDC |
Prot-Dna |
B |
parmBSC1 |
TIP3P |
DNA-B Duplex Naked ParmBSC1 TIP3P Electroneutral |
2,000 |
GCTTAAAATAACAATAC |
|
NAFlex_ProtDNA_2kdz |
2KDZ |
Prot-Dna |
B |
parmBSC1 |
TIP3P |
DNA-B Duplex Naked ParmBSC1 TIP3P Electroneutral |
2,000 |
AAGATAACGATATTTA |
|
NAFlex_ProtDNA_2l1g |
2L1G |
Prot-Dna |
B |
parmBSC1 |
TIP3P |
DNA-B Duplex Naked ParmBSC1 TIP3P Electroneutral |
2,000 |
CGCTGCCCACACAAGC |
|
NAFlex_ProtDNA_2lt7 |
2LT7 |
Prot-Dna |
B |
parmBSC1 |
TIP3P |
DNA-B Duplex Naked ParmBSC1 TIP3P Electroneutral |
2,000 |
CGTTATTGGCAGGAAGCAC |
|
NAFlex_ProtDNA_2or1 |
2OR1 |
Dna |
B |
parmBSC1 |
TIP3P |
DNA-B Duplex Naked ParmBSC1 TIP3P Electroneutral |
2,000 |
AAGTACAAACTTTCTTGTAT |
|
NAFlex_ProtDNA_2stw |
2STW |
Dna |
B |
parmBSC1 |
TIP3P |
DNA-B Duplex Naked ParmBSC1 TIP3P Electroneutral |
2,000 |
TCGAACTTCCGGCTCGA |
|
NAFlex_ProtDNA_3f27 |
3F27 |
Dna |
B |
parmBSC1 |
TIP3P |
DNA-B Duplex Naked ParmBSC1 TIP3P Electroneutral |
2,000 |
CCAGGACAATAGAGAC |
|
NAFlex_ProtDNA_3jxc |
3JXC |
Dna |
B |
parmBSC1 |
TIP3P |
DNA-B Duplex Naked ParmBSC1 TIP3P Electroneutral |
2,000 |
CATTTAAGATATCTTAAATG |
|
NAFlex_ProtDNA_3u2b |
3U2B |
Dna |
B |
parmBSC1 |
TIP3P |
DNA-B Duplex Naked ParmBSC1 TIP3P Electroneutral |
2,000 |
GTCTCTATTGTCCTGG |
|
NAFlex_ProtDNA_4f6n |
4F6N |
Dna |
B |
parmBSC1 |
TIP3P |
DNA-B Duplex Naked ParmBSC1 TIP3P Electroneutral |
2,000 |
CGTATAGACGCGGTGACAC |
|
NAFlex_ProtDNA_4hqe |
4HQE |
Dna |
B |
parmBSC1 |
TIP3P |
DNA-B Duplex Naked ParmBSC1 TIP3P Electroneutral |
2,000 |
AGTATAATTATTATACC |
|
NAFlex_ProtDNA_4oi7 |
4OI7 |
Dna |
B |
parmBSC1 |
TIP3P |
DNA-B Duplex Naked ParmBSC1 TIP3P Electroneutral |
2,000 |
CACGTTCGTAGCATCGTTGCAG |
|
NAFlex_ProtDNA_s1j5n |
1J5N |
Dna |
B |
parmBSC1 |
TIP3P |
DNA-B Duplex Naked ParmBSC1 TIP3P Electroneutral |
2,000 |
GGGGTGATTGTTCAG |
|
NAFlex_ProtDNA_s2lef |
2LEF |
Dna |
B |
parmBSC1 |
TIP3P |
DNA-B Duplex Naked ParmBSC1 TIP3P Electroneutral |
2,000 |
CACCCTTTGAAGCTC |
|
NAFlex_ProtDNA_1a0a |
1A0A |
Prot-Dna |
B |
parmBSC1 |
TIP3P |
DNA-B Duplex Naked ParmBSC1 TIP3P Electroneutral |
2,000 |
CTAGTCCCACGTGTGAG |
|
NAFlex_2l8f |
2L8F |
Rna |
A |
parmBSC0 |
TIP3P |
RNA-A Duplex Naked ParmBSC0 TIP3P Electroneutral Internal-loops |
1,750 |
GUGAAGCCCGU |
|
NAFlex_BSC1-BSC0 |
1NAJ |
Dna |
B |
parmBSC0 |
TIP3P |
DNA-B Duplex Naked TIP3P Electroneutral ParmBSC0 |
1,500 |
CGCGAATTCGCG |
|
NAFlex_BSC1-C36 |
1NAJ |
Dna |
B |
Charmm36 |
TIP3P |
DNA-B Duplex Naked Charmm36 TIP3P Electroneutral |
1,500 |
CGCGAATTCGCGCGCGAATTCGCG |
|
NAFlex_BSC1-Garcia |
1NAJ |
Dna |
B |
ParmBSC0-CG |
TIP3P |
DNA-B Duplex Naked Cheng-Garcia TIP3P Electroneutral |
1,500 |
CGCGAATTCGCG |
|
NAFlex_BSC1-OL1 |
1NAJ |
Dna |
B |
ParmBSC0-OL1 |
TIP3P |
DNA-B Duplex Naked OL1 TIP3P Electroneutral |
1,500 |
CGCGAATTCGCG |
|
NAFlex_BSC1-OL1-OL4 |
1NAJ |
Dna |
B |
ParmBSC0-OL1-OL4 |
TIP3P |
DNA-B Duplex Naked OL1+OL4 TIP3P Electroneutral |
1,500 |
CGCGAATTCGCG |
|
NAFlex_BSC1-OL4 |
1NAJ |
Dna |
B |
ParmBSC0-OL4 |
TIP3P |
DNA-B Duplex Naked OL4 TIP3P Electroneutral |
1,500 |
CGCGAATTCGCG |
|
NAFlex_DDD_II |
1BNA |
Dna |
B |
parmBSC1 |
TIP3P |
DNA-B Duplex Naked DDD ParmBSC1 TIP3P Electroneutral |
1,200 |
CGCGAATTCGCG |
|
NAFlex_2oue |
2OUE |
Rna |
A |
parmBSC0 |
TIP3P |
RNA-A Duplex Naked ParmBSC0 TIP3P Electroneutral Flipout-bases Overhanging-bases Hammerhead Ribozyme Bulges |
1,065 |
UCCCXGUCCACCG | CGGUGAGAAGGG | GGCAGAGAAACACACGA |
|
NAFlex_hybrid |
NONE |
Rna |
A |
parmBSC0 |
TIP3P |
Hybrid-A Duplex Naked ParmBSC0 TIP3P Electroneutral |
1,037 |
CTACACGG |
|
NAFlex_2m18 |
2M18 |
Rna |
A |
parmBSC0 |
TIP3P |
RNA-A Quadruplex Naked ParmBSC0 TIP3P Electroneutral G-Quadruplex Tetraplex |
1,036 |
GGGUUAGGGU | GGGUUAGGGU | GGGUUAGGGU | GGGUUAGGGU |
|
NAFlex_2mhi |
2MHI |
Rna |
A |
parmBSC0 |
TIP3P |
RNA-A Duplex Naked ParmBSC0 TIP3P Electroneutral Telomerase |
1,027 |
GGAAACGCCGCGGUCAGCUCGGCUGCUGCGAAGAGUUCGUCUCUGUUGUUUCC |
|
NAFlex_GAGA_RNA |
1Q9A |
Rna |
A |
parmBSC0 |
TIP3P |
RNA-A Single Stranded Naked ParmBSC0 TIP3P Electroneutral Sarcin-Ricin Hairpin loop Flipout-bases |
1,022 |
CGCGAGAGCG |
|
NAFlex_437d |
437D |
Rna |
A |
parmBSC0 |
TIP3P |
RNA-A Single Stranded Naked ParmBSC0 TIP3P Electroneutral Pseudoknot Flipout-bases Overhanging-bases Loops |
1,015 |
GGCGCGGCACCGUCCGCGGAACAAACGG |
|
NAFlex_1d11 |
1D11 |
Dna |
B |
parmBSC1 |
TIP3P |
DNA-B Duplex Naked ParmBSC1 TIP3P Electroneutral Ligand-intercalator |
1,000 |
CGTACG |
|
NAFlex_1dcw |
1DCW |
Dna |
B |
parmBSC1 |
TIP3P |
DNA-B HollidayJunction Naked ParmBSC1 TIP3P Electroneutral 4way-junction inverted-repeat |
1,000 |
CCGGTACCGG | CCGGTACCGG | CCGGTACCGG |
|
NAFlex_1p71 |
1P71 |
Prot-Dna |
B |
parmBSC1 |
SPCE |
DNA-B Duplex Complex ParmBSC1 SPC/E AddedSalt Protein-nuc Flipout-bases |
1,000 |
TGCTTATCAATTTGTTGCA |
|
NAFlex_1p71B |
1P71 |
Prot-Dna |
B |
parmBSC1 |
SPCE |
DNA-B Duplex Complex ParmBSC1 SPC/E AddedSalt |
1,000 |
TGCAACAAATTGTTGCA |
|
NAFlex_1pqt |
1PQT |
Dna |
B |
parmBSC1 |
TIP3P |
DNA-B Single Stranded Naked ParmBSC1 TIP3P AddedSalt Hairpin |
1,000 |
GCGAAGC |
|
NAFlex_1tro |
1TRO |
Prot-Dna |
B |
parmBSC1 |
SPCE |
DNA-B Duplex Complex ParmBSC1 SPC/E AddedSalt Prot-nuc Overhanging-bases |
1,000 |
GTACTAGTTAACTAGTAC |
|
NAFlex_2dgc |
2DGC |
Prot-Dna |
B |
parmBSC1 |
SPCE |
DNA-B Duplex Complex ParmBSC1 SPC/E AddedSalt Protein-nuc |
1,000 |
GGAGATGACGTCATCTCC |
|
NAFlex_2jwv |
2JWV |
Rna |
A |
parmBSC1 |
TIP3P |
RNA-A Single Stranded Hairpin-Loop Naked ParmBSC1 TIP3P AddedSalt |
1,000 |
GAUACUUGAAACUGUAAGGUUGGCGUAUC |
|
NAFlex_2lef |
2LEF |
Dna |
B |
parmBSC1 |
SPCE |
DNA-B Duplex Naked ParmBSC1 SPC/E AddedSalt |
1,000 |
CACCCTTTGAAGCTC |
|
NAFlex_2y95 |
2Y95 |
Rna |
A |
parmBSC1 |
TIP3P |
RNA-A Single-Stranded Naked ParmBSC1 TIP3P AddedSalt Hairpin-loop |
1,000 |
GGCGCAUCGGCGCC |
|
NAFlex_32mer |
NONE |
Dna |
B |
parmBSC1 |
TIP3P |
DNA-B Duplex Naked ParmBSC1 TIP3P Electroneutral |
1,000 |
ATGGATCCATAGACCAGAACATGATGTTCTCA |
|
NAFlex_3jxc |
3JXC |
Prot-Dna |
B |
parmBSC1 |
SPCE |
DNA-B Duplex Complex ParmBSC1 SPC/E AddedSalt Protein-nuc |
1,000 |
CATTTAAGATATCTTAAATG |
|
NAFlex_AGCG |
NONE |
Dna |
B |
parmBSC1 |
SPCE |
DNA-B Duplex Naked ParmBSC1 SPC/E AddedSalt |
1,000 |
GCCGAGCGAGCGAGCGGC |
|
NAFlex_AGCT |
NONE |
Dna |
B |
parmBSC1 |
SPCE |
DNA-B Duplex Naked ParmBSC1 SPC/E AddedSalt |
1,000 |
GCCTAGCTAGCTAGCTGC |
|
NAFlex_CGTG |
NONE |
Dna |
B |
parmBSC1 |
SPCE |
DNA-B Duplex Naked ParmBSC1 SPC/E AddedSalt |
1,000 |
GCTGCGTGCGTGCGTGGC |
|
NAFlex_GGGA |
NONE |
Dna |
B |
parmBSC1 |
SPCE |
DNA-B Duplex Naked ParmBSC1 SPC/E AddedSalt |
1,000 |
GCGAGGGAGGGAGGGAGC |
|
NAFlex_GGGC |
NONE |
Dna |
B |
parmBSC1 |
SPCE |
DNA-B Duplex Naked ParmBSC1 SPC/E AddedSalt |
1,000 |
GCGCGGGCGGGCGGGCGC |
|
NAFlex_GGGG |
NONE |
Dna |
B |
parmBSC1 |
SPCE |
DNA-B Duplex Naked ParmBSC1 SPC/E AddedSalt |
1,000 |
GCGGGGGGGGGGGGGGGC |
|
NAFlex_GGGT |
NONE |
Dna |
B |
parmBSC1 |
SPCE |
DNA-B Duplex Naked ParmBSC1 SPC/E AddedSalt |
1,000 |
GCGTGGGTGGGTGGGTGC |
|
NAFlex_HTQ |
1KF1 |
Dna |
G-loop |
parmBSC1 |
TIP3P |
DNA Single-Stranded G-Loop Naked ParmBSC1 TIP3P Electroneutral Telomer |
1,000 |
AGGGTTAGGGTTAGGGTTAGGG |
|
NAFlex_lks1 |
NONE |
Dna |
B |
parmBSC1 |
TIP3P |
DNA-B Duplex Naked ParmBSC1 TIP3P Electroneutral |
1,000 |
GCCTATAAACGCCTATAA |
|
NAFlex_lks2 |
NONE |
Dna |
B |
parmBSC1 |
TIP3P |
DNA-B Duplex Naked ParmBSC1 TIP3P Electroneutral |
1,000 |
CTAGGTGGATGACTCATT |
|
NAFlex_lks3 |
NONE |
Dna |
B |
parmBSC1 |
TIP3P |
DNA-B Duplex Naked ParmBSC1 TIP3P Electroneutral |
1,000 |
CACGGAACCGGTTCCGTG |
|
NAFlex_lks4 |
NONE |
Dna |
B |
parmBSC1 |
TIP3P |
DNA-B Duplex Naked ParmBSC1 TIP3P Electroneutral |
1,000 |
GGCGCGCACCACGCGCGG |
|
NAFlex_oxyQ |
1JRN |
Dna |
- |
parmBSC1 |
TIP3P |
DNA Quadruplex Naked ParmBSC1 TIP3P AddedSalt Loop Telomer |
1,000 |
GGGGTTTTGGGG |
|
NAFlex_1zgw |
1ZGW |
Dna |
B |
parmBSC1 |
SPCE |
DNA-B Duplex ParmBSC1 SPC/E AddedSalt |
1,000 |
GCAAATTAAAGCGCAAGA |
|
NAFlex_1yo5 |
1YO5 |
Dna |
B |
parmBSC1 |
SPCE |
DNA-B Duplex ParmBSC1 SPC/E AddedSalt |
1,000 |
ACACATCCTGCTA |
|
NAFlex_1hlv |
1HLV |
Dna |
B |
parmBSC1 |
SPCE |
DNA-B Duplex Protein-Nuc ParmBSC1 SPC/E AddedSalt |
1,000 |
AATCCCGTTTCCAACGAAGGC |
|
NAFlex_1j5n |
1J5N |
Dna |
B |
parmBSC1 |
SPCE |
DNA-B Duplex Naked ParmBSC1 SPC/E AddedSalt |
1,000 |
CTGAACAATCACCCC |
|
NAFlex_1iv6 |
1IV6 |
Dna |
B |
parmBSC1 |
SPCE |
DNA-B Duplex Naked ParmBSC1 SPC/E AddedSalt |
1,000 |
CCCTAACCCTAAC |
|
NAFlex_DDD_II_1 |
1NAJ |
Dna |
B |
parmBSC1 |
TIP3P |
DNA-B Duplex Naked DDD ParmBSC1 TIP3P Electroneutral |
1,000 |
CGCGAATTCGCG |
|
NAFlex_DDD_II_2 |
1NAJ |
Dna |
B |
parmBSC1 |
TIP3P |
DNA-B Duplex Naked DDD ParmBSC1 TIP3P Electroneutral |
1,000 |
CGCGAATTCGCG |
|
NAFlex_DSpcCheatham |
1BNA |
Dna |
B |
parmBSC1 |
SPCE |
DNA-B Duplex Naked ParmBSC1 SPC/E Electroneutral |
1,000 |
CGCGAATTCGCG |
|
NAFlex_DSpcDang |
1BNA |
Dna |
B |
parmBSC1 |
SPCE |
DNA-B Duplex Naked ParmBSC1 SPC/E Electroneutral |
1,000 |
CGCGAATTCGCG |
|
NAFlex_DTipCheatham |
1BNA |
Dna |
B |
parmBSC1 |
TIP3P |
DNA-B Duplex Naked ParmBSC1 TIP3P Electroneutral |
1,000 |
CGCGAATTCGCG |
|
NAFlex_2hdc |
1HLV |
Dna |
B |
parmBSC1 |
SPCE |
DNA-B Duplex Protein-Nuc ParmBSC1 SPC/E AddedSalt |
1,000 |
GCTTAAAATAACAATAC |
|
NAFlex_muAAAA |
NONE |
Dna |
B |
parmBSC0 |
SPCE |
DNA-B Duplex Naked ParmBSC0 SPC/E AddedSalt |
1,000 |
GCAAAAAAAAAAAAAAGC |
|
NAFlex_muAAAC |
NONE |
Dna |
B |
parmBSC0 |
SPCE |
DNA-B Duplex Naked ParmBSC0 SPC/E AddedSalt |
1,000 |
GCACAAACAAACAAACGC |
|
NAFlex_muAAAT |
NONE |
Dna |
B |
parmBSC0 |
SPCE |
DNA-B Duplex Naked ParmBSC0 SPC/E AddedSalt |
1,000 |
GCATAAATAAATAAATGC |
|
NAFlex_muAGAG |
NONE |
Dna |
B |
parmBSC0 |
SPCE |
DNA-B Duplex Naked ParmBSC0 SPC/E AddedSalt |
1,000 |
GCAGAGAGAGAGAGAGGC |
|
NAFlex_muAGCT |
NONE |
Dna |
B |
parmBSC0 |
SPCE |
DNA-B Duplex Naked ParmBSC0 SPC/E AddedSalt |
1,000 |
GCCTAGCTAGCTAGCTGC |
|
NAFlex_muAGGA |
NONE |
Dna |
B |
parmBSC0 |
SPCE |
DNA-B Duplex Naked ParmBSC0 SPC/E AddedSalt |
1,000 |
GCGAAGGAAGGAAGGAGC |
|
NAFlex_muAGGC |
NONE |
Dna |
B |
parmBSC0 |
SPCE |
DNA-B Duplex Naked ParmBSC0 SPC/E AddedSalt |
1,000 |
GCGCAGGCAGGCAGGCGC |
|
NAFlex_muAGGT |
NONE |
Dna |
B |
parmBSC0 |
SPCE |
DNA-B Duplex Naked ParmBSC0 SPC/E AddedSalt |
1,000 |
GCGTAGGTAGGTAGGTGC |
|
NAFlex_muAGTC |
NONE |
Dna |
B |
parmBSC0 |
SPCE |
DNA-B Duplex Naked ParmBSC0 SPC/E AddedSalt |
1,000 |
GCTCAGTCAGTCAGTCGC |
|
NAFlex_muAGTG |
NONE |
Dna |
B |
parmBSC0 |
SPCE |
DNA-B Duplex Naked ParmBSC0 SPC/E AddedSalt |
1,000 |
GCTGAGTGAGTGAGTGGC |
|
NAFlex_muATGC |
NONE |
Dna |
B |
parmBSC0 |
SPCE |
DNA-B Duplex Naked ParmBSC0 SPC/E AddedSalt |
1,000 |
GCGCATGCATGCATGCGC |
|
NAFlex_muCAAG |
NONE |
Dna |
B |
parmBSC0 |
SPCE |
DNA-B Duplex Naked ParmBSC0 SPC/E AddedSalt |
1,000 |
GCAGCAAGCAAGCAAGGC |
|
NAFlex_muCAAT |
NONE |
Dna |
B |
parmBSC0 |
SPCE |
DNA-B Duplex Naked ParmBSC0 SPC/E AddedSalt |
1,000 |
GCATCAATCAATCAATGC |
|
NAFlex_muCGCG |
NONE |
Dna |
B |
parmBSC0 |
SPCE |
DNA-B Duplex Naked ParmBSC0 SPC/E AddedSalt |
1,000 |
GCCGCGCGCGCGCGCGGC |
|
NAFlex_muCGGA |
NONE |
Dna |
B |
parmBSC0 |
SPCE |
DNA-B Duplex Naked ParmBSC0 SPC/E AddedSalt |
1,000 |
GCGACGGACGGACGGAGC |
|
NAFlex_muCGGC |
NONE |
Dna |
B |
parmBSC0 |
SPCE |
DNA-B Duplex Naked ParmBSC0 SPC/E AddedSalt |
1,000 |
GCGCCGGCCGGCCGGCGC |
|
NAFlex_muCGGT |
NONE |
Dna |
B |
parmBSC0 |
SPCE |
DNA-B Duplex Naked ParmBSC0 SPC/E AddedSalt |
1,000 |
GCGTCGGTCGGTCGGTGC |
|
NAFlex_muCGTA |
NONE |
Dna |
B |
parmBSC0 |
SPCE |
DNA-B Duplex Naked ParmBSC0 SPC/E AddedSalt |
1,000 |
GCTACGTACGTACGTAGC |
|
NAFlex_muCGTG |
NONE |
Dna |
B |
parmBSC0 |
SPCE |
DNA-B Duplex Naked ParmBSC0 SPC/E AddedSalt |
1,000 |
GCTGCGTGCGTGCGTGGC |
|
NAFlex_muGAAA |
NONE |
Dna |
B |
parmBSC0 |
SPCE |
DNA-B Duplex Naked ParmBSC0 SPC/E AddedSalt |
1,000 |
GCAAGAAAGAAAGAAAGC |
|
NAFlex_muGAAC |
NONE |
Dna |
B |
parmBSC0 |
SPCE |
DNA-B Duplex Naked ParmBSC0 SPC/E AddedSalt |
1,000 |
GCACGAACGAACGAACGC |
|
NAFlex_muGAAT |
NONE |
Dna |
B |
parmBSC0 |
SPCE |
DNA-B Duplex Naked ParmBSC0 SPC/E AddedSalt |
1,000 |
GCATGAATGAATGAATGC |
|
NAFlex_muGATA |
NONE |
Dna |
B |
parmBSC0 |
SPCE |
DNA-B Duplex Naked ParmBSC0 SPC/E AddedSalt |
1,000 |
GCTAGATAGATAGATAGC |
|
NAFlex_muGGGA |
NONE |
Dna |
B |
parmBSC0 |
SPCE |
DNA-B Duplex Naked ParmBSC0 SPC/E AddedSalt |
1,000 |
GCGAGGGAGGGAGGGAGC |
|
NAFlex_muGGGC |
NONE |
Dna |
B |
parmBSC0 |
SPCE |
DNA-B Duplex Naked ParmBSC0 SPC/E AddedSalt |
1,000 |
GCGCGGGCGGGCGGGCGC |
|
NAFlex_muGGGG |
NONE |
Dna |
B |
parmBSC0 |
SPCE |
DNA-B Duplex Naked ParmBSC0 SPC/E AddedSalt |
1,000 |
GCGGGGGGGGGGGGGGGC |
|
NAFlex_muGGGT |
NONE |
Dna |
B |
parmBSC0 |
SPCE |
DNA-B Duplex Naked ParmBSC0 SPC/E AddedSalt |
1,000 |
GCGTGGGTGGGTGGGTGC |
|
NAFlex_muTAAC |
NONE |
Dna |
B |
parmBSC0 |
SPCE |
DNA-B Duplex Naked ParmBSC0 SPC/E AddedSalt |
1,000 |
GCACTAACTAACTAACGC |
|
NAFlex_muTAAG |
NONE |
Dna |
B |
parmBSC0 |
SPCE |
DNA-B Duplex Naked ParmBSC0 SPC/E AddedSalt |
1,000 |
GCAGTAAGTAAGTAAGGC |
|
NAFlex_muTAAT |
NONE |
Dna |
B |
parmBSC0 |
SPCE |
DNA-B Duplex Naked ParmBSC0 SPC/E AddedSalt |
1,000 |
GCATTAATTAATTAATGC |
|
NAFlex_muTATA |
NONE |
Dna |
B |
parmBSC0 |
SPCE |
DNA-B Duplex Naked ParmBSC0 SPC/E AddedSalt |
1,000 |
GCTATATATATATATAGC |
|
NAFlex_muTCGA |
NONE |
Dna |
B |
parmBSC1 |
SPCE |
DNA-B Duplex Naked ParmBSC1 SPC/E AddedSalt |
1,000 |
GCGATCGATCGATCGAGC |
|
NAFlex_muTGGA |
NONE |
Dna |
B |
parmBSC0 |
SPCE |
DNA-B Duplex Naked ParmBSC0 SPC/E AddedSalt |
1,000 |
GCGATGGATGGATGGAGC |
|
NAFlex_muTGGC |
NONE |
Dna |
B |
parmBSC0 |
SPCE |
DNA-B Duplex Naked ParmBSC0 SPC/E AddedSalt |
1,000 |
GCGCTGGCTGGCTGGCGC |
|
NAFlex_muTGGT |
NONE |
Dna |
B |
parmBSC0 |
SPCE |
DNA-B Duplex Naked ParmBSC0 SPC/E AddedSalt |
1,000 |
GCGTTGGTTGGTTGGTGC |
|
NAFlex_muTGTA |
NONE |
Dna |
B |
parmBSC0 |
SPCE |
DNA-B Duplex Naked ParmBSC0 SPC/E AddedSalt |
1,000 |
GCTATGTATGTATGTAGC |
|
NAFlex_muTGTC |
NONE |
Dna |
B |
parmBSC0 |
SPCE |
DNA-B Duplex Naked ParmBSC0 SPC/E AddedSalt |
1,000 |
GCTCTGTCTGTCTGTCGC |
|
NAFlex_muTGTG |
NONE |
Dna |
B |
parmBSC0 |
SPCE |
DNA-B Duplex Naked ParmBSC0 SPC/E AddedSalt |
1,000 |
GCTGTGTGTGTGTGTGGC |
|
NAFlex_miniABC_K_1 |
NONE |
Dna |
B |
parmBSC1 |
SPC/E |
B-DNA Duplex Naked ParmBSC1 SPC/E 0.15 mol KCl |
1,000 |
GCAACGTGCTATGGAAGC |
|
NAFlex_miniABC_K_3 |
NONE |
Dna |
B |
parmBSC1 |
SPC/E |
B-DNA Duplex Naked ParmBSC1 SPC/E 0.15 mol KCl |
1,000 |
GCAGAAACAGCTCTGCGC |
|
NAFlex_miniABC_K_9 |
NONE |
Dna |
B |
parmBSC1 |
SPC/E |
B-DNA Duplex Naked ParmBSC1 SPC/E 0.15 mol KCl |
1,000 |
GCGTTAGATTAAAATTGC |
|
NAFlex_miniABC_Na_2 |
NONE |
Dna |
B |
parmBSC1 |
SPC/E |
B-DNA Duplex Naked ParmBSC1 SPC/E 0.15 mol NaCl |
1,000 |
GCAATAAGTACCAGGAGC |
|
NAFlex_miniABC_Na_8 |
NONE |
Dna |
B |
parmBSC1 |
SPC/E |
B-DNA Duplex Naked ParmBSC1 SPC/E 0.15 mol NaCl |
1,000 |
GCGGAGGGCCGGGTGGGC |
|
NAFlex_miniABC_NaK_13 |
NONE |
Dna |
B |
parmBSC1 |
SPC/E |
B-DNA Duplex Naked ParmBSC1 SPC/E 0.15 mol NaCl/KCl 50%/50% |
1,000 |
GCTTGTGACGGCTAGGGC |
|
NAFlex_miniABC_NaK_7 |
NONE |
Dna |
B |
parmBSC1 |
SPC/E |
B-DNA Duplex Naked ParmBSC1 SPC/E 0.15 mol NaCl/KCl 50%/50% |
1,000 |
GCGACCGAATGTAATTGC |
|
NAFlex_miniABC_K_10 |
NONE |
Dna |
B |
parmBSC1 |
SPC/E |
B-DNA Duplex Naked ParmBSC1 SPC/E 0.15 mol KCl |
1,000 |
GCTACGCGGATCGAGAGC |
|
NAFlex_miniABC_K_4 |
NONE |
Dna |
B |
parmBSC1 |
SPC/E |
B-DNA Duplex Naked ParmBSC1 SPC/E 0.15 mol KCl |
1,000 |
GCAGGCGCAAGACTGAGC |
|
NAFlex_miniABC_Na_1 |
NONE |
Dna |
B |
parmBSC1 |
SPC/E |
B-DNA Duplex Naked ParmBSC1 SPC/E 0.15 mol NaCl |
1,000 |
GCAACGTGCTATGGAAGC |
|
NAFlex_miniABC_Na_3 |
NONE |
Dna |
B |
parmBSC1 |
SPC/E |
B-DNA Duplex Naked ParmBSC1 SPC/E 0.15 mol NaCl |
1,000 |
GCAGAAACAGCTCTGCGC |
|
NAFlex_miniABC_Na_9 |
NONE |
Dna |
B |
parmBSC1 |
SPC/E |
B-DNA Duplex Naked ParmBSC1 SPC/E 0.15 mol NaCl |
1,000 |
GCGTTAGATTAAAATTGC |
|
NAFlex_miniABC_NaK_2 |
NONE |
Dna |
B |
parmBSC1 |
SPC/E |
B-DNA Duplex Naked ParmBSC1 SPC/E 0.15 mol NaCl/KCl 50%/50% |
1,000 |
GCAATAAGTACCAGGAGC |
|
NAFlex_miniABC_NaK_8 |
NONE |
Dna |
B |
parmBSC1 |
SPC/E |
B-DNA Duplex Naked ParmBSC1 SPC/E 0.15 mol NaCl/KCl 50%/50% |
1,000 |
GCGGAGGGCCGGGTGGGC |
|
NAFlex_miniABC_K_11 |
NONE |
Dna |
B |
parmBSC1 |
SPC/E |
B-DNA Duplex Naked ParmBSC1 SPC/E 0.15 mol KCl |
1,000 |
GCTGATATACGATGCAGC |
|
NAFlex_miniABC_K_5 |
NONE |
Dna |
B |
parmBSC1 |
SPC/E |
B-DNA Duplex Naked ParmBSC1 SPC/E 0.15 mol KCl |
1,000 |
GCATTGGGGACACTACGC |
|
NAFlex_miniABC_Na_10 |
NONE |
Dna |
B |
parmBSC1 |
SPC/E |
B-DNA Duplex Naked ParmBSC1 SPC/E 0.15 mol NaCl |
1,000 |
GCTACGCGGATCGAGAGC |
|
NAFlex_miniABC_Na_4 |
NONE |
Dna |
B |
parmBSC1 |
SPC/E |
B-DNA Duplex Naked ParmBSC1 SPC/E 0.15 mol NaCl |
1,000 |
GCAGGCGCAAGACTGAGC |
|
NAFlex_miniABC_NaK_1 |
NONE |
Dna |
B |
parmBSC1 |
SPC/E |
B-DNA Duplex Naked ParmBSC1 SPC/E 0.15 mol NaCl/KCl 50%/50% |
1,000 |
GCAACGTGCTATGGAAGC |
|
NAFlex_miniABC_NaK_3 |
NONE |
Dna |
B |
parmBSC1 |
SPC/E |
B-DNA Duplex Naked ParmBSC1 SPC/E 0.15 mol NaCl/KCl 50%/50% |
1,000 |
GCAGAAACAGCTCTGCGC |
|
NAFlex_miniABC_NaK_9 |
NONE |
Dna |
B |
parmBSC1 |
SPC/E |
B-DNA Duplex Naked ParmBSC1 SPC/E 0.15 mol NaCl/KCl 50%/50% |
1,000 |
GCGTTAGATTAAAATTGC |
|
NAFlex_miniABC_K_12 |
NONE |
Dna |
B |
parmBSC1 |
SPC/E |
B-DNA Duplex Naked ParmBSC1 SPC/E 0.15 mol KCl |
1,000 |
GCTGGCATGAAGCGACGC |
|
NAFlex_miniABC_K_6 |
NONE |
Dna |
B |
parmBSC1 |
SPC/E |
B-DNA Duplex Naked ParmBSC1 SPC/E 0.15 mol KCl |
1,000 |
GCGAACTCAAAGGTTGGC |
|
NAFlex_miniABC_Na_11 |
NONE |
Dna |
B |
parmBSC1 |
SPC/E |
B-DNA Duplex Naked ParmBSC1 SPC/E 0.15 mol NaCl |
1,000 |
GCTGATATACGATGCAGC |
|
NAFlex_miniABC_Na_5 |
NONE |
Dna |
B |
parmBSC1 |
SPC/E |
B-DNA Duplex Naked ParmBSC1 SPC/E 0.15 mol NaCl |
1,000 |
GCATTGGGGACACTACGC |
|
NAFlex_miniABC_NaK_10 |
NONE |
Dna |
B |
parmBSC1 |
SPC/E |
B-DNA Duplex Naked ParmBSC1 SPC/E 0.15 mol NaCl/KCl 50%/50% |
1,000 |
GCTACGCGGATCGAGAGC |
|
NAFlex_miniABC_NaK_4 |
NONE |
Dna |
B |
parmBSC1 |
SPC/E |
B-DNA Duplex Naked ParmBSC1 SPC/E 0.15 mol NaCl/KCl 50%/50% |
1,000 |
GCAGGCGCAAGACTGAGC |
|
NAFlex_miniABC_K_13 |
NONE |
Dna |
B |
parmBSC1 |
SPC/E |
B-DNA Duplex Naked ParmBSC1 SPC/E 0.15 mol KCl |
1,000 |
GCTTGTGACGGCTAGGGC |
|
NAFlex_miniABC_K_7 |
NONE |
Dna |
B |
parmBSC1 |
SPC/E |
B-DNA Duplex Naked ParmBSC1 SPC/E 0.15 mol KCl |
1,000 |
GCGACCGAATGTAATTGC |
|
NAFlex_miniABC_Na_12 |
NONE |
Dna |
B |
parmBSC1 |
SPC/E |
B-DNA Duplex Naked ParmBSC1 SPC/E 0.15 mol NaCl |
1,000 |
GCTGGCATGAAGCGACGC |
|
NAFlex_miniABC_Na_6 |
NONE |
Dna |
B |
parmBSC1 |
SPC/E |
B-DNA Duplex Naked ParmBSC1 SPC/E 0.15 mol NaCl |
1,000 |
GCGAACTCAAAGGTTGGC |
|
NAFlex_miniABC_NaK_11 |
NONE |
Dna |
B |
parmBSC1 |
SPC/E |
B-DNA Duplex Naked ParmBSC1 SPC/E 0.15 mol NaCl/KCl 50%/50% |
1,000 |
GCTGATATACGATGCAGC |
|
NAFlex_miniABC_NaK_5 |
NONE |
Dna |
B |
parmBSC1 |
SPC/E |
B-DNA Duplex Naked ParmBSC1 SPC/E 0.15 mol NaCl/KCl 50%/50% |
1,000 |
GCATTGGGGACACTACGC |
|
NAFlex_miniABC_K_2 |
NONE |
Dna |
B |
parmBSC1 |
SPC/E |
B-DNA Duplex Naked ParmBSC1 SPC/E 0.15 mol KCl |
1,000 |
GCAATAAGTACCAGGAGC |
|
NAFlex_miniABC_K_8 |
NONE |
Dna |
B |
parmBSC1 |
SPC/E |
B-DNA Duplex Naked ParmBSC1 SPC/E 0.15 mol KCl |
1,000 |
GCGGAGGGCCGGGTGGGC |
|
NAFlex_miniABC_Na_13 |
NONE |
Dna |
B |
parmBSC1 |
SPC/E |
B-DNA Duplex Naked ParmBSC1 SPC/E 0.15 mol NaCl |
1,000 |
GCTTGTGACGGCTAGGGC |
|
NAFlex_miniABC_Na_7 |
NONE |
Dna |
B |
parmBSC1 |
SPC/E |
B-DNA Duplex Naked ParmBSC1 SPC/E 0.15 mol NaCl |
1,000 |
GCGACCGAATGTAATTGC |
|
NAFlex_miniABC_NaK_12 |
NONE |
Dna |
B |
parmBSC1 |
SPC/E |
B-DNA Duplex Naked ParmBSC1 SPC/E 0.15 mol NaCl/KCl 50%/50% |
1,000 |
GCTGGCATGAAGCGACGC |
|
NAFlex_miniABC_NaK_6 |
NONE |
Dna |
B |
parmBSC1 |
SPC/E |
B-DNA Duplex Naked ParmBSC1 SPC/E 0.15 mol NaCl/KCl 50%/50% |
1,000 |
GCGAACTCAAAGGTTGGC |
|
NAFlex_RNA_miniABC_KCl_1 |
NONE |
Rna |
A |
parmBSC0+OL3 |
TIP3P |
RNA-A Duplex Naked TIP3P Electroneutral |
1,000 |
GCAACGUGCUAUGGAAGC |
|
NAFlex_RNA_miniABC_KCl_13 |
NONE |
Rna |
A |
parmBSC0+OL3 |
TIP3P |
RNA-A Duplex Naked TIP3P AddedSalt |
1,000 |
GCUUGUGACGGCUAGGGC |
|
NAFlex_RNA_miniABC_KCl_2 |
NONE |
Rna |
A |
parmBSC0+OL3 |
TIP3P |
RNA-A Duplex Naked TIP3P AddedSalt |
1,000 |
GCAAUAAGUACCAGGAGC |
|
NAFlex_RNA_miniABC_KCl_4 |
NONE |
Rna |
A |
parmBSC0+OL3 |
TIP3P |
RNA-A Duplex Naked TIP3P AddedSalt |
1,000 |
GCAGGCGCAAGACUGAGC |
|
NAFlex_RNA_miniABC_KCl_5 |
NONE |
Rna |
A |
parmBSC0+OL3 |
TIP3P |
RNA-A Duplex Naked TIP3P AddedSalt |
1,000 |
GCAUUGGGGACACUACGC |
|
NAFlex_RNA_miniABC_KCl_6 |
NONE |
Rna |
A |
parmBSC0+OL3 |
TIP3P |
RNA-A Duplex Naked TIP3P AddedSalt |
1,000 |
GCGAACUCAAAGGUUGGC |
|
NAFlex_RNA_miniABC_KCl_7 |
NONE |
Rna |
A |
parmBSC0+OL3 |
TIP3P |
RNA-A Duplex Naked TIP3P AddedSalt |
1,000 |
GCGACCGAAUGUAAUUGC |
|
NAFlex_RNA_miniABC_KCl_8 |
NONE |
Rna |
A |
parmBSC0+OL3 |
TIP3P |
RNA-A Duplex Naked TIP3P AddedSalt |
1,000 |
GCGGAGGGCCGGGUGGGC |
|
NAFlex_Tirr_RNA_hairpin |
NONE |
Prot-Rna |
A |
parmBSC0+OL3 |
TIP3P |
RNA-A Protein-Nuc TIP3P AddedSalt |
1,000 |
GGACAAGAUGCCUUAUGUGGACUUCACCACAUAAGGCAUCUUGUCC |
|
NAFlex_Tirr_Dimer_RNA_hairpin |
NONE |
Prot-Rna |
A |
parmBSC0+OL3 |
TIP3P |
RNA-A Protein-Nuc TIP3P AddedSalt |
1,000 |
GGACAAGAUGCCUUAUGUGGACUUCACCACAUAAGGCAUCUUGUCC |
|
NAFlex_RNA_miniABC_KCl_9 |
NONE |
Rna |
A |
parmBSC0+OL3 |
TIP3P |
RNA-A Duplex Naked TIP3P AddedSalt |
1,000 |
GCGUUAGAUUAAAAUUGC |
|
NAFlex_RNA_miniABC_KCl_11 |
NONE |
Rna |
A |
parmBSC0+OL3 |
TIP3P |
RNA-A Duplex Naked TIP3P AddedSalt |
1,000 |
GCUGAUAUACGAUGCAGC |
|
NAFlex_RNA_miniABC_KCl_10 |
NONE |
Rna |
A |
parmBSC0+OL3 |
TIP3P |
RNA-A Duplex Naked TIP3P AddedSalt |
1,000 |
GCUACGCGGAUCGAGAGC |
|
NAFlex_RNA_miniABC_KCl_12 |
NONE |
Rna |
A |
parmBSC0+OL3 |
TIP3P |
RNA-A Duplex Naked TIP3P AddedSalt |
1,000 |
GCUGGCAUGAAGCGACGC |
|
NAFlex_miniABC_1_CG |
NONE |
Dna |
B |
CGeNArate |
No |
DNA-B Duplex Naked |
1,000 |
GCAACGTGCTATGGAAGC |
|
NAFlex_miniABC_2_CG |
NONE |
Dna |
B |
CGeNArate |
No |
DNA-B Duplex Naked |
1,000 |
GCAATAAGTACCAGGAGC |
|
NAFlex_miniABC_3_CG |
NONE |
Dna |
B |
CGeNArate |
No |
DNA-B Duplex Naked |
1,000 |
GCAGAAACAGCTCTGCGC |
|
NAFlex_miniABC_4_CG |
NONE |
Dna |
B |
CGeNArate |
No |
DNA-B Duplex Naked |
1,000 |
GCAGGCGCAAGACTGAGC |
|
NAFlex_miniABC_5_CG |
NONE |
Dna |
B |
CGeNArate |
No |
DNA-B Duplex Naked |
1,000 |
GCATTGGGGACACTACGC |
|
NAFlex_miniABC_6_CG |
NONE |
Dna |
B |
CGeNArate |
No |
DNA-B Duplex Naked |
1,000 |
GCGAACTCAAAGGTTGGC |
|
NAFlex_miniABC_7_CG |
NONE |
Dna |
B |
CGeNArate |
No |
DNA-B Duplex Naked |
1,000 |
GCGACCGAATGTAATTGC |
|
NAFlex_miniABC_8_CG |
NONE |
Dna |
B |
CGeNArate |
No |
DNA-B Duplex Naked |
1,000 |
GCGGAGGGCCGGGTGGGC |
|
NAFlex_miniABC_9_CG |
NONE |
Dna |
B |
CGeNArate |
No |
DNA-B Duplex Naked |
1,000 |
GCGTTAGATTAAAATTGC |
|
NAFlex_miniABC_10_CG |
NONE |
Dna |
B |
CGeNArate |
No |
DNA-B Duplex Naked |
1,000 |
GCTACGCGGATCGAGAGC |
|
NAFlex_miniABC_11_CG |
NONE |
Dna |
B |
CGeNArate |
No |
DNA-B Duplex Naked |
1,000 |
GCTGATATACGATGCAGC |
|
NAFlex_miniABC_12_CG |
NONE |
Dna |
B |
CGeNArate |
No |
DNA-B Duplex Naked |
1,000 |
GCTGGCATGAAGCGACGC |
|
NAFlex_miniABC_13_CG |
NONE |
Dna |
B |
CGeNArate |
No |
DNA-B Duplex Naked |
1,000 |
GCTTGTGACGGCTAGGGC |
|
NAFlex_56merL_CG |
NONE |
Dna |
B |
CGeNArate |
No |
DNA-B Duplex Naked |
1,000 |
CGCCGGCAGTAGCCGAAAAAATAGGCGCGCGCTCAAAAAAATGCCCCATGCCGCGC |
|
NAFlex_CGTG_CG |
NONE |
Dna |
B |
CGeNArate |
No |
DNA-B Duplex Naked |
1,000 |
GCTGCGTGCGTGCGTGGC |
|
NAFlex_AGCT_CG |
NONE |
Dna |
B |
CGeNArate |
No |
DNA-B Duplex Naked |
1,000 |
GCCTAGCTAGCTAGCTGC |
|
NAFlex_AGCG_CG |
NONE |
Dna |
B |
CGeNArate |
No |
DNA-B Duplex Naked |
1,000 |
GCCGAGCGAGCGAGCGGC |
|
NAFlex_CTAG_CG |
NONE |
Dna |
B |
CGeNArate |
No |
DNA-B Duplex Naked |
1,000 |
CGCTCTCTAGAGAGGC |
|
NAFlex_2lef_CG |
NONE |
Dna |
B |
CGeNArate |
No |
DNA-B Duplex Naked |
1,000 |
CACCCTTTGAAGCTC |
|
NAFlex_1j5n_CG |
NONE |
Dna |
B |
CGeNArate |
No |
DNA-B Duplex Naked |
1,000 |
CTGAACAATCACCCC |
|
NAFlex_1zgw_CG |
NONE |
Dna |
B |
CGeNArate |
No |
DNA-B Duplex Naked |
1,000 |
GCAAATTAAAGCGCAAGA |
|
NAFlex_DTipDang015M_CG |
NONE |
Dna |
B |
CGeNArate |
No |
DNA-B Duplex Naked |
1,000 |
CGCGAATTCGCG |
|
NAFlex_DDD_II_1_CG |
NONE |
Dna |
B |
CGeNArate |
No |
DNA-B Duplex Naked DDD |
1,000 |
CGCGAATTCGCG |
|
NAFlex_2hkb_CG |
NONE |
Dna |
B |
CGeNArate |
No |
DNA-B Duplex Naked |
1,000 |
CTCGGCGCCATC |
|
NAFlex_2k0v_CG |
NONE |
Dna |
B |
CGeNArate |
No |
DNA-B Duplex Naked |
1,000 |
CCTCTGGTCTCC |
|
NAFlex_2l8q_CG |
NONE |
Dna |
B |
CGeNArate |
No |
DNA-B Duplex Naked |
1,000 |
CGCATGCTACGC |
|
NAFlex_2m2c_CG |
NONE |
Dna |
B |
CGeNArate |
No |
DNA-B Duplex Naked |
1,000 |
GCGCATGCTACGCG |
|
NAFlex_Circular26_CG |
NONE |
Dna |
B |
CGeNArate |
No |
DNA-B Duplex Naked |
1,000 |
TCTCTCTCTCTCTCTCACCACCGCGTACAAGAAAGTTTGTTCTTTCATTTCGCCATACAGCTGCCTCGCGCGTTTCGGTGATATCGGTGAAAACCCTTCCCGTTTCGCTCAAGTTAGTATAAAAAAGCTGAACGAGAAACGTAAAATGATATAAATATCAATATATTAAATTAGATTTTGCATAAAAAACAGACTACATAATACTGTAAAACACAACATATGCAGTCACTATGAATCAACTACTTAGATGGTATTAGTGACCTGTAACAGAGCTGAGGCATCTTTCTCAATGAAAGTGTCGGAACTCGGTACATAGGCTTCCGGCTGATAGTAGTCGTATACGACTACTATCAGCCGGAAGCCTATGTACCGAGTTCCGACACTTTCATTGAGAAAGATGCCTCAGCTCTGTTACAGGTCACTAATACCATCTAAGTAGTTGATTCATAGTGACTGCATATGTTGTGTTTTACAGTATTATGTAGTCTGTTTTTTATGCAAAATCTAATTTAATATATTGATATTTATATCATTTTACGTTTCTCGTTCAGCTTTTTTATACTAACTTGAGCGAAACGGGAAGGGTTTTCACCGATATCACCGAAACGCGCGAGGCAGCTGTATGGCGAAATGAAAGAACAAACTTTCTTGTACGCGGTGGTGAGAGAGAGAGAGAGA |
|
NAFlex_Circular29_1_CG |
NONE |
Dna |
B |
CGeNArate |
No |
DNA-B Duplex Naked |
1,000 |
TCTCTCTCTCTCTCTCACCACCGCGTACAAGAAAGTTTGTTCTTTCATTTCGCCATACAGCTGCCTCGCGCGTTTCGGTGATATCGGTGAAAACCCTTCCCGTTTCGCTCAAGTTAGTATAAAAAAGCTGAACGAGAAACGTAAAATGATATAAATATCAATATATTAAATTAGATTTTGCATAAAAAACAGACTACATAATACTGTAAAACACAACATATGCAGTCACTATGAATCAACTACTTAGATGGTATTAGTGACCTGTAACAGAGCTGAGGCATCTTTCTCAATGAAAGTGTCGGAACTCGGTACATAGGCTTCCGGCTGATAGTAGTCGTATACGACTACTATCAGCCGGAAGCCTATGTACCGAGTTCCGACACTTTCATTGAGAAAGATGCCTCAGCTCTGTTACAGGTCACTAATACCATCTAAGTAGTTGATTCATAGTGACTGCATATGTTGTGTTTTACAGTATTATGTAGTCTGTTTTTTATGCAAAATCTAATTTAATATATTGATATTTATATCATTTTACGTTTCTCGTTCAGCTTTTTTATACTAACTTGAGCGAAACGGGAAGGGTTTTCACCGATATCACCGAAACGCGCGAGGCAGCTGTATGGCGAAATGAAAGAACAAACTTTCTTGTACGCGGTGGTGAGAGAGAGAGAGAGA |
|
NAFlex_Circular29_2_CG |
NONE |
Dna |
B |
CGeNArate |
No |
DNA-B Duplex Naked |
1,000 |
TCTCTCTCTCTCTCTCACCACCGCGTACAAGAAAGTTTGTTCTTTCATTTCGCCATACAGCTGCCTCGCGCGTTTCGGTGATATCGGTGAAAACCCTTCCCGTTTCGCTCAAGTTAGTATAAAAAAGCTGAACGAGAAACGTAAAATGATATAAATATCAATATATTAAATTAGATTTTGCATAAAAAACAGACTACATAATACTGTAAAACACAACATATGCAGTCACTATGAATCAACTACTTAGATGGTATTAGTGACCTGTAACAGAGCTGAGGCATCTTTCTCAATGAAAGTGTCGGAACTCGGTACATAGGCTTCCGGCTGATAGTAGTCGTATACGACTACTATCAGCCGGAAGCCTATGTACCGAGTTCCGACACTTTCATTGAGAAAGATGCCTCAGCTCTGTTACAGGTCACTAATACCATCTAAGTAGTTGATTCATAGTGACTGCATATGTTGTGTTTTACAGTATTATGTAGTCTGTTTTTTATGCAAAATCTAATTTAATATATTGATATTTATATCATTTTACGTTTCTCGTTCAGCTTTTTTATACTAACTTGAGCGAAACGGGAAGGGTTTTCACCGATATCACCGAAACGCGCGAGGCAGCTGTATGGCGAAATGAAAGAACAAACTTTCTTGTACGCGGTGGTGAGAGAGAGAGAGAGA |
|
NAFlex_Circular30_1_CG |
NONE |
Dna |
B |
CGeNArate |
No |
DNA-B Duplex Naked |
1,000 |
TCTCTCTCTCTCTCTCACCACCGCGTACAAGAAAGTTTGTTCTTTCATTTCGCCATACAGCTGCCTCGCGCGTTTCGGTGATATCGGTGAAAACCCTTCCCGTTTCGCTCAAGTTAGTATAAAAAAGCTGAACGAGAAACGTAAAATGATATAAATATCAATATATTAAATTAGATTTTGCATAAAAAACAGACTACATAATACTGTAAAACACAACATATGCAGTCACTATGAATCAACTACTTAGATGGTATTAGTGACCTGTAACAGAGCTGAGGCATCTTTCTCAATGAAAGTGTCGGAACTCGGTACATAGGCTTCCGGCTGATAGTAGTCGTATACGACTACTATCAGCCGGAAGCCTATGTACCGAGTTCCGACACTTTCATTGAGAAAGATGCCTCAGCTCTGTTACAGGTCACTAATACCATCTAAGTAGTTGATTCATAGTGACTGCATATGTTGTGTTTTACAGTATTATGTAGTCTGTTTTTTATGCAAAATCTAATTTAATATATTGATATTTATATCATTTTACGTTTCTCGTTCAGCTTTTTTATACTAACTTGAGCGAAACGGGAAGGGTTTTCACCGATATCACCGAAACGCGCGAGGCAGCTGTATGGCGAAATGAAAGAACAAACTTTCTTGTACGCGGTGGTGAGAGAGAGAGAGAGA |
|
NAFlex_Circular30_2_CG |
NONE |
Dna |
B |
CGeNArate |
No |
DNA-B Duplex Naked |
1,000 |
TCTCTCTCTCTCTCTCACCACCGCGTACAAGAAAGTTTGTTCTTTCATTTCGCCATACAGCTGCCTCGCGCGTTTCGGTGATATCGGTGAAAACCCTTCCCGTTTCGCTCAAGTTAGTATAAAAAAGCTGAACGAGAAACGTAAAATGATATAAATATCAATATATTAAATTAGATTTTGCATAAAAAACAGACTACATAATACTGTAAAACACAACATATGCAGTCACTATGAATCAACTACTTAGATGGTATTAGTGACCTGTAACAGAGCTGAGGCATCTTTCTCAATGAAAGTGTCGGAACTCGGTACATAGGCTTCCGGCTGATAGTAGTCGTATACGACTACTATCAGCCGGAAGCCTATGTACCGAGTTCCGACACTTTCATTGAGAAAGATGCCTCAGCTCTGTTACAGGTCACTAATACCATCTAAGTAGTTGATTCATAGTGACTGCATATGTTGTGTTTTACAGTATTATGTAGTCTGTTTTTTATGCAAAATCTAATTTAATATATTGATATTTATATCATTTTACGTTTCTCGTTCAGCTTTTTTATACTAACTTGAGCGAAACGGGAAGGGTTTTCACCGATATCACCGAAACGCGCGAGGCAGCTGTATGGCGAAATGAAAGAACAAACTTTCTTGTACGCGGTGGTGAGAGAGAGAGAGAGA |
|
NAFlex_Circular31_CG |
NONE |
Dna |
B |
CGeNArate |
No |
DNA-B Duplex Naked |
1,000 |
TCTCTCTCTCTCTCTCACCACCGCGTACAAGAAAGTTTGTTCTTTCATTTCGCCATACAGCTGCCTCGCGCGTTTCGGTGATATCGGTGAAAACCCTTCCCGTTTCGCTCAAGTTAGTATAAAAAAGCTGAACGAGAAACGTAAAATGATATAAATATCAATATATTAAATTAGATTTTGCATAAAAAACAGACTACATAATACTGTAAAACACAACATATGCAGTCACTATGAATCAACTACTTAGATGGTATTAGTGACCTGTAACAGAGCTGAGGCATCTTTCTCAATGAAAGTGTCGGAACTCGGTACATAGGCTTCCGGCTGATAGTAGTCGTATACGACTACTATCAGCCGGAAGCCTATGTACCGAGTTCCGACACTTTCATTGAGAAAGATGCCTCAGCTCTGTTACAGGTCACTAATACCATCTAAGTAGTTGATTCATAGTGACTGCATATGTTGTGTTTTACAGTATTATGTAGTCTGTTTTTTATGCAAAATCTAATTTAATATATTGATATTTATATCATTTTACGTTTCTCGTTCAGCTTTTTTATACTAACTTGAGCGAAACGGGAAGGGTTTTCACCGATATCACCGAAACGCGCGAGGCAGCTGTATGGCGAAATGAAAGAACAAACTTTCTTGTACGCGGTGGTGAGAGAGAGAGAGAGA |
|
NAFlex_Circular32_CG |
NONE |
Dna |
B |
CGeNArate |
No |
DNA-B Duplex Naked |
1,000 |
TCTCTCTCTCTCTCTCACCACCGCGTACAAGAAAGTTTGTTCTTTCATTTCGCCATACAGCTGCCTCGCGCGTTTCGGTGATATCGGTGAAAACCCTTCCCGTTTCGCTCAAGTTAGTATAAAAAAGCTGAACGAGAAACGTAAAATGATATAAATATCAATATATTAAATTAGATTTTGCATAAAAAACAGACTACATAATACTGTAAAACACAACATATGCAGTCACTATGAATCAACTACTTAGATGGTATTAGTGACCTGTAACAGAGCTGAGGCATCTTTCTCAATGAAAGTGTCGGAACTCGGTACATAGGCTTCCGGCTGATAGTAGTCGTATACGACTACTATCAGCCGGAAGCCTATGTACCGAGTTCCGACACTTTCATTGAGAAAGATGCCTCAGCTCTGTTACAGGTCACTAATACCATCTAAGTAGTTGATTCATAGTGACTGCATATGTTGTGTTTTACAGTATTATGTAGTCTGTTTTTTATGCAAAATCTAATTTAATATATTGATATTTATATCATTTTACGTTTCTCGTTCAGCTTTTTTATACTAACTTGAGCGAAACGGGAAGGGTTTTCACCGATATCACCGAAACGCGCGAGGCAGCTGTATGGCGAAATGAAAGAACAAACTTTCTTGTACGCGGTGGTGAGAGAGAGAGAGAGA |
|
NAFlex_Circular33_CG |
NONE |
Dna |
B |
CGeNArate |
No |
DNA-B Duplex Naked |
1,000 |
TCTCTCTCTCTCTCTCACCACCGCGTACAAGAAAGTTTGTTCTTTCATTTCGCCATACAGCTGCCTCGCGCGTTTCGGTGATATCGGTGAAAACCCTTCCCGTTTCGCTCAAGTTAGTATAAAAAAGCTGAACGAGAAACGTAAAATGATATAAATATCAATATATTAAATTAGATTTTGCATAAAAAACAGACTACATAATACTGTAAAACACAACATATGCAGTCACTATGAATCAACTACTTAGATGGTATTAGTGACCTGTAACAGAGCTGAGGCATCTTTCTCAATGAAAGTGTCGGAACTCGGTACATAGGCTTCCGGCTGATAGTAGTCGTATACGACTACTATCAGCCGGAAGCCTATGTACCGAGTTCCGACACTTTCATTGAGAAAGATGCCTCAGCTCTGTTACAGGTCACTAATACCATCTAAGTAGTTGATTCATAGTGACTGCATATGTTGTGTTTTACAGTATTATGTAGTCTGTTTTTTATGCAAAATCTAATTTAATATATTGATATTTATATCATTTTACGTTTCTCGTTCAGCTTTTTTATACTAACTTGAGCGAAACGGGAAGGGTTTTCACCGATATCACCGAAACGCGCGAGGCAGCTGTATGGCGAAATGAAAGAACAAACTTTCTTGTACGCGGTGGTGAGAGAGAGAGAGAGA |
|
NAFlex_implSolvMD_CG |
NONE |
Dna |
B |
CGeNArate |
No |
DNA-B Duplex Naked |
1,000 |
GCAACGTGCTATGGAAGC |
|
NAFlex_YCL020W_CG |
NONE |
Dna |
B |
CGeNArate |
No |
DNA-B Duplex Naked |
1,000 |
ATGGAATCCCAACAATTACATCAAAATCCACGTTCTCTTCATGGTAGCGCCTATGCTTCGGTTACTTCTAAGGAAGTCCCATCAAATCAAGATCCGTTAGCCGTTTCAGCTTCCAATTTACCGGAATTTGATAGAGATTCCACTAAGGTTAATTCTCAACAAGAGACAACACCTGGGACATCAGCTGTTCCAGAGAACCATCATCATGTCTCTCCTCAACCTGCTTCAGTACCACCTCCACAGAATGGACAGTACCAACAGCACGGCATGATGACCCCAAACAAAGCTATGGCCTCTAACTGGGCACATTACCAACAACCGTCTATGATGACGTGTTCACATTATCAAACGTCACCTGCGTATTATCAACCGGACCCACACTATCCGTTGCCACAGTATATCCCACCACTGAGTACTTCCTCACCTGATCCAATCGATTCACAGAATCAACACTCTGAAGTACCTCAAGCTGAGACAAAGGTGAGAAATAACGTCTTACCACCACACACTTTAACATCAGAAGAAAACTTTTCTACATGGGTTAAATTTTACATCAGATTTTTGAAGAACTCTAATCTCGGTGACATCATTCCAAATGACCAGGGTGAAATCAAAAGACAAATGACTTATGAAGAACATGCGTATATATACAATACCTTCCAAGCATTTGCCCCATTTCATTTATTGCCAACATGGGTAAAACAAATTTTAGAAATTAATTATGCTGACATCCTTACAGTCCTTTGTAAAAGTGTGTCCAAAATGCAAACTAACAATCAAGAATTAAAGGATTGGATAGCTCTTGCCAACCTTGAGTACGACGGAAGTACATCTGCTGATACATTTGAAATTACAGTCAGTACGATCATTCAGAGGCTAAAAGAAAACAATATCAATGTTAGCGACAGATTGGCCTGTCAACTAATACTTAAAGGTCTATCCGGTGACTTCAAATACCTACGTAATCAATATCGTACCAAAACGAACATGAAACTTTCCCAATTATTCGCTGAAATTCAGTTAATATATGACGAAAATAAAATCATGAATCTAAATAAACCGTCCCAATACAAACAACACAGCGAATACAAAAATGTTTCTCGCACATCTCCAAACACGACTAACACAAAGGTTACAACTCGTAATTATCAGAGAACAAATAGTTCAAAACCAAGAGCAGCAAAAGCTCACAATATTGCTACATCTAGTAAATTCTCAAGGGTGAACAATGATCACATTAATGAATCAACCGTTTCATCACAATACTTAAGCGATGACAACGAACTTAGTCTTAGGCCAGCAACAGAAAGAATCTAATTAGATTCTTTCTGTTGCTGGCCTAAGACTAAGTTCGTTGTCATCGCTTAAGTATTGTGATGAAACGGTTGATTCATTAATGTGATCATTGTTCACCCTTGAGAATTTACTAGATGTAGCAATATTGTGAGCTTTTGCTGCTCTTGGTTTTGAACTATTTGTTCTCTGATAATTACGAGTTGTAACCTTTGTGTTAGTCGTGTTTGGAGATGTGCGAGAAACATTTTTGTATTCGCTGTGTTGTTTGTATTGGGACGGTTTATTTAGATTCATGATTTTATTTTCGTCATATATTAACTGAATTTCAGCGAATAATTGGGAAAGTTTCATGTTCGTTTTGGTACGATATTGATTACGTAGGTATTTGAAGTCACCGGATAGACCTTTAAGTATTAGTTGACAGGCCAATCTGTCGCTAACATTGATATTGTTTTCTTTTAGCCTCTGAATGATCGTACTGACTGTAATTTCAAATGTATCAGCAGATGTACTTCCGTCGTACTCAAGGTTGGCAAGAGCTATCCAATCCTTTAATTCTTGATTGTTAGTTTGCATTTTGGACACACTTTTACAAAGGACTGTAAGGATGTCAGCATAATTAATTTCTAAAATTTGTTTTACCCATGTTGGCAATAAATGAAATGGGGCAAATGCTTGGAAGGTATTGTATATATACGCATGTTCTTCATAAGTCATTTGTCTTTTGATTTCACCCTGGTCATTTGGAATGATGTCACCGAGATTAGAGTTCTTCAAAAATCTGATGTAAAATTTAACCCATGTAGAAAAGTTTTCTTCTGATGTTAAAGTGTGTGGTGGTAAGACGTTATTTCTCACCTTTGTCTCAGCTTGAGGTACTTCAGAGTGTTGATTCTGTGAATCGATTGGATCAGGTGAGGAAGTACTCAGTGGTGGGATATACTGTGGCAACGGATAGTGTGGGTCCGGTTGATAATACGCAGGTGACGTTTGATAATGTGAACACGTCATCATAGACGGTTGTTGGTAATGTGCCCAGTTAGAGGCCATAGCTTTGTTTGGGGTCATCATGCCGTGCTGTTGGTACTGTCCATTCTGTGGAGGTGGTACTGAAGCAGGTTGAGGAGAGACATGATGATGGTTCTCTGGAACAGCTGATGTCCCAGGTGTTGTCTCTTGTTGAGAATTAACCTTAGTGGAATCTCTATCAAATTCCGGTAAATTGGAAGCTGAAACGGCTAACGGATCTTGATTTGATGGGACTTCCTTAGAAGTAACCGAAGCATAGGCGCTACCATGAAGAGAACGTGGATTTTGATGTAATTGTTGGGATTCCAT |
|
NAFlex_Z-DNA-4M |
1I0T |
Dna |
Z |
parmBSC1 |
TIP3P |
DNA-Z Duplex Naked ParmBSC1 TIP3P AddedSalt |
946 |
CGCGCGCGCG |
|
NAFlex_2rn1 |
2RN1 |
Rna |
A |
parmBSC0 |
TIP3P |
RNA-A Naked ParmBSC0 TIP3P Electroneutral TAR Hairpin-loops Aptamer Kissing-loops |
906 |
GAGCCCUGGGAGGCUC |
|
NAFlex_DDD_800ns |
1NAJ |
Dna |
B |
parmBSC1 |
TIP3P |
DNA-B Duplex Naked DDD ParmBSC1 TIP3P Electroneutral |
800 |
CGCGAATTCGCG |
|
NAFlex_Subi |
1GQU |
Dna |
DNA hoogsteen |
parmBSC1 |
TIP3P |
DNA-Hoogsteen Duplex Naked ParmBSC1 TIP3P Electroneutral Flipout-bases Overhanging-bases |
720 |
ATATATATATAT |
|
NAFlex_groovebinder |
2DND |
Dna |
B |
parmBSC1 |
TIP3P |
DNA-B Duplex Naked ParmBSC1 TIP3P Electroneutral minor-groove-binder |
700 |
CGCAAATTTGCG |
|
NAFlex_nucWT16 |
1KX5 |
Dna |
B |
parmBSC1 |
TIP3P |
DNA-B Duplex Naked ParmBSC1 TIP3P AddedSalt |
700 |
ATCAATATCCACCTGCAGATACTACCAAAAGTGTATTTGGAAACTGCTCCATCAAAAGGCATGTTCAGCTGGAATCCAGCTGAACATGCCTTTTGATGGAGCAGTTTCCAAATACACTTTTGGTAGTATCTGCAGGTGGATATTGAT |
|
NAFlex_H3S57p16 |
1KX5 |
Dna |
B |
parmBSC1 |
TIP3P |
DNA-B Duplex Naked ParmBSC1 TIP3P AddedSalt |
700 |
ATCAATATCCACCTGCAGATACTACCAAAAGTGTATTTGGAAACTGCTCCATCAAAAGGCATGTTCAGCTGGAATCCAGCTGAACATGCCTTTTGATGGAGCAGTTTCCAAATACACTTTTGGTAGTATCTGCAGGTGGATATTGAT | ATCAATATCCACCTGCAGATACTACCAAAAGTGTATTTGGAAACTGCTCCATCAAAAGGCATGTTCAGCTGGATTCCAGCTGAACATGCCTTTTGATGGAGCAGTTTCCAAATACACTTTTGGTAGTATCTGCAGGTGGATATTGAT |
|
NAFlex_2hkb |
2HKB |
Dna |
B |
parmBSC1 |
TIP3P |
DNA-B Duplex Naked ParmBSC1 TIP3P Electroneutral |
590 |
CTCGGCGCCATC |
|
NAFlex_2k0v |
2K0V |
Dna |
B |
parmBSC1 |
TIP3P |
DNA-B Duplex Naked ParmBSC1 TIP3P Electroneutral |
590 |
CCTCTGGTCTCC |
|
NAFlex_2l8q |
2L8Q |
Dna |
B |
parmBSC1 |
TIP3P |
DNA-B Duplex Naked ParmBSC1 TIP3P Electroneutral |
590 |
CGCATGCTACGC |
|
NAFlex_2lwg |
2LWG |
Dna |
B |
parmBSC1 |
TIP3P |
DNA-B Duplex Naked ParmBSC1 TIP3P Electroneutral |
590 |
GGATATATCC |
|
NAFlex_2m2c |
2M2C |
Dna |
B |
parmBSC1 |
TIP3P |
DNA-B Duplex Naked ParmBSC1 TIP3P Electroneutral |
590 |
GCGCATGCTACGCG |
|
NAFlex_2nq1 |
2NQ1 |
Dna |
B |
parmBSC1 |
TIP3P |
DNA-B Duplex Naked ParmBSC1 TIP3P Electroneutral |
590 |
CCTCAGGCCTCC |
|
NAFlex_1kx5 |
1KX5 |
Prot-Dna |
B |
parmBSC1 |
TIP3P |
DNA-B Duplex Complex ParmBSC1 TIP3P AddedSalt Protein-nuc Nucleosome |
500 |
ATCAATATCCACCTGCAGATACTACCAAAAGTGTATTTGGAAACTGCTCCATCAAAAGGCATGTTCAGCTGGAATCCAGCTGAACATGCCTTTTGATGGAGCAGTTTCCAAATACACTTTTGGTAGTATCTGCAGGTGGATATTGAT |
|
NAFlex_56merL |
NONE |
Dna |
B |
parmBSC1 |
TIP3P |
DNA-B Duplex Naked ParmBSC1 TIP3P AddedSalt |
500 |
CGCCGGCAGTAGCCGAAAAAATAGGCGCGCGCTCAAAAAAATGCCCCATGCCGCGC |
|
NAFlex_56merTIP3P |
NONE |
Dna |
B |
parmBSC1 |
TIP3P |
DNA-B Duplex Naked ParmBSC1 TIP3P Electroneutral |
500 |
CGCGATTGCCTAACGGACAGGCATAGACGTCTATGCCTGTCCGTTAGGCAATCGCG |
|
NAFlex_AAf |
NONE |
Dna |
B |
parmBSC1 |
TIP3P |
DNA-B Duplex Naked ModifiedNucleotides ParmBSC1 TIP3P Electroneutral |
500 |
CCATACAATACGG |
|
NAFlex_ACGT |
NONE |
Dna |
B |
parmBSC1 |
TIP3P |
DNA-B Duplex Naked ParmBSC1 TIP3P Electroneutral |
500 |
CGCGACGTCGCG |
|
NAFlex_CTAG_1 |
NONE |
Dna |
B |
parmBSC1 |
SPCE |
DNA-B Duplex Naked ParmBSC1 SPC/E AddedSalt |
500 |
CGTCGGCTAGCCGAGC |
|
NAFlex_CTAG_10 |
NONE |
Dna |
B |
parmBSC1 |
TIP3P |
DNA-B Duplex Naked ParmBSC1 TIP3P AddedSalt |
500 |
CGCGCGCTAGCGCGGC |
|
NAFlex_CTAG_11 |
NONE |
Dna |
B |
parmBSC1 |
TIP3P |
DNA-B Duplex Naked ParmBSC1 TIP3P AddedSalt |
500 |
CGTCTACTAGAGAGGC |
|
NAFlex_CTAG_12 |
NONE |
Dna |
B |
parmBSC1 |
TIP3P |
DNA-B Duplex Naked ParmBSC1 TIP3P AddedSalt |
500 |
CGTCTACTAGCGAGGC |
|
NAFlex_CTAG_13 |
NONE |
Dna |
B |
parmBSC1 |
TIP3P |
DNA-B Duplex Naked ParmBSC1 TIP3P AddedSalt |
500 |
CGTCTACTAGGGAGGC |
|
NAFlex_CTAG_15 |
NONE |
Dna |
B |
parmBSC1 |
TIP3P |
DNA-B Duplex Naked ParmBSC1 TIP3P AddedSalt |
500 |
CGTCTCCTAGAGAGGC |
|
NAFlex_CTAG_16 |
NONE |
Dna |
B |
parmBSC1 |
TIP3P |
DNA-B Duplex Naked ParmBSC1 TIP3P AddedSalt |
500 |
CGTCTCCTAGCGAGGC |
|
NAFlex_CTAG_17 |
NONE |
Dna |
B |
parmBSC1 |
TIP3P |
DNA-B Duplex Naked ParmBSC1 TIP3P AddedSalt |
500 |
CGTCTCCTAGGGAGGC |
|
NAFlex_CTAG_18 |
NONE |
Dna |
B |
parmBSC1 |
TIP3P |
DNA-B Duplex Naked ParmBSC1 TIP3P AddedSalt |
500 |
CGTCTGCTAGAGAGGC |
|
NAFlex_CTAG_19 |
NONE |
Dna |
B |
parmBSC1 |
TIP3P |
DNA-B Duplex Naked ParmBSC1 TIP3P AddedSalt |
500 |
CGTCTGCTAGCGAGGC |
|
NAFlex_CTAG_2 |
NONE |
Dna |
B |
parmBSC1 |
TIP3P |
DNA-B Duplex Naked ParmBSC1 TIP3P AddedSalt |
500 |
CGTCTCCTAGGAGAGC |
|
NAFlex_CTAG_20 |
NONE |
Dna |
B |
parmBSC1 |
TIP3P |
DNA-B Duplex Naked ParmBSC1 TIP3P AddedSalt |
500 |
CGTCTTCTAGAGAGGC |
|
NAFlex_CTAG_21 |
NONE |
Dna |
B |
parmBSC1 |
TIP3P |
DNA-B Duplex Naked ParmBSC1 TIP3P AddedSalt |
500 |
CGGAGACTAGACTCGC |
|
NAFlex_CTAG_22 |
NONE |
Dna |
B |
parmBSC1 |
TIP3P |
DNA-B Duplex Naked ParmBSC1 TIP3P AddedSalt |
500 |
CGGAGACTAGCCTCGC |
|
NAFlex_CTAG_23 |
NONE |
Dna |
B |
parmBSC1 |
TIP3P |
DNA-B Duplex Naked ParmBSC1 TIP3P AddedSalt |
500 |
CGGAGACTAGGCTCGC |
|
NAFlex_CTAG_24 |
NONE |
Dna |
B |
parmBSC1 |
TIP3P |
DNA-B Duplex Naked ParmBSC1 TIP3P AddedSalt |
500 |
CGGAGACTAGTCTCGC |
|
NAFlex_CTAG_25 |
NONE |
Dna |
B |
parmBSC1 |
TIP3P |
DNA-B Duplex Naked ParmBSC1 TIP3P AddedSalt |
500 |
CGGAGCCTAGACTCGC |
|
NAFlex_CTAG_26 |
NONE |
Dna |
B |
parmBSC1 |
TIP3P |
DNA-B Duplex Naked ParmBSC1 TIP3P AddedSalt |
500 |
CGGAGCCTAGCCTCGC |
|
NAFlex_CTAG_27 |
NONE |
Dna |
B |
parmBSC1 |
TIP3P |
DNA-B Duplex Naked ParmBSC1 TIP3P AddedSalt |
500 |
CGGAGCCTAGGCTCGC |
|
NAFlex_CTAG_28 |
NONE |
Dna |
B |
parmBSC1 |
TIP3P |
DNA-B Duplex Naked ParmBSC1 TIP3P AddedSalt |
500 |
CGGAGGCTAGACTCGC |
|
NAFlex_CTAG_29 |
NONE |
Dna |
B |
parmBSC1 |
TIP3P |
DNA-B Duplex Naked ParmBSC1 TIP3P AddedSalt |
500 |
CGGAGGCTAGCCTCGC |
|
NAFlex_CTAG_3 |
NONE |
Dna |
B |
parmBSC1 |
TIP3P |
DNA-B Duplex Naked ParmBSC1 TIP3P AddedSalt |
500 |
CGAAAACTAGAAAAGC |
|
NAFlex_CTAG_30 |
NONE |
Dna |
B |
parmBSC1 |
TIP3P |
DNA-B Duplex Naked ParmBSC1 TIP3P AddedSalt |
500 |
CGGAGTCTAGACTCGC |
|
NAFlex_CTAG_31 |
NONE |
Dna |
B |
parmBSC1 |
TIP3P |
DNA-B Duplex Naked ParmBSC1 TIP3P AddedSalt |
500 |
CGCTAGCTAGCTAGGC |
|
NAFlex_CTAG_32 |
NONE |
Dna |
B |
parmBSC1 |
TIP3P |
DNA-B Duplex Naked ParmBSC1 TIP3P AddedSalt |
500 |
CGCTAGCTAGCTAGGC |
|
NAFlex_CTAG_4 |
NONE |
Dna |
B |
parmBSC1 |
TIP3P |
DNA-B Duplex Naked ParmBSC1 TIP3P AddedSalt |
500 |
CGAAAACTAGTTTTGC |
|
NAFlex_CTAG_5 |
NONE |
Dna |
B |
parmBSC1 |
TIP3P |
DNA-B Duplex Naked ParmBSC1 TIP3P AddedSalt |
500 |
CGATATCTAGATATGC |
|
NAFlex_CTAG_6 |
NONE |
Dna |
B |
parmBSC1 |
TIP3P |
DNA-B Duplex Naked ParmBSC1 TIP3P AddedSalt |
500 |
CGTATACTAGTATAGC |
|
NAFlex_CTAG_7 |
NONE |
Dna |
B |
parmBSC1 |
TIP3P |
DNA-B Duplex Naked ParmBSC1 TIP3P AddedSalt |
500 |
CGGGGGCTAGGGGGGC |
|
NAFlex_CTAG_8 |
NONE |
Dna |
B |
parmBSC1 |
TIP3P |
DNA-B Duplex Naked ParmBSC1 TIP3P AddedSalt |
500 |
CGGGGGCTAGCCCCGC |
|
NAFlex_CTAG_9 |
NONE |
Dna |
B |
parmBSC1 |
TIP3P |
DNA-B Duplex Naked ParmBSC1 TIP3P AddedSalt |
500 |
CGGCGCCTAGGCGCGC |
|
NAFlex_CTAG_flex |
NONE |
Dna |
B |
parmBSC1 |
TIP3P |
DNA-B Duplex Naked ParmBSC1 TIP3P AddedSalt |
500 |
CGCTCTCTAGAGAGGC |
|
NAFlex_CTAG_rig |
NONE |
Dna |
B |
parmBSC1 |
TIP3P |
DNA-B Duplex Naked ParmBSC1 TIP3P AddedSalt |
500 |
CGCAAGCTAGCTTGGC |
|
NAFlex_GGf |
NONE |
Dna |
B |
parmBSC1 |
TIP3P |
DNA-B Duplex Naked ModifiedNucleotides ParmBSC1 TIP3P Electroneutral |
500 |
CCATACGATACGG |
|
NAFlex_TCGA |
NONE |
Dna |
B |
parmBSC1 |
TIP3P |
DNA-B Duplex Naked ParmBSC1 TIP3P Electroneutral |
500 |
CGCGTCGACGCG |
|
NAFlex_TCGAhmet |
NONE |
Dna |
B |
parmBSC1 |
TIP3P |
DNA-B Duplex Naked ParmBSC1 TIP3P Electroneutral |
500 |
CGCGTXGACGCG |
|
NAFlex_TCGAmet |
NONE |
Dna |
B |
parmBSC1 |
TIP3P |
DNA-B Duplex Naked ParmBSC1 TIP3P Electroneutral |
500 |
CGCGTXGACGCG |
|
NAFlex_CTAG_14 |
NONE |
Dna |
B |
parmBSC1 |
TIP3P |
DNA-B Duplex Naked ParmBSC1 TIP3P AddedSalt |
500 |
CGTCTACTAGTGAGGC |
|
NAFlex_FOXO3_crystal_rep0 |
2UZK |
Dna |
B |
parmBSC1 |
SPCE |
DNA-B Duplex Protein-Nuc SPC/E AddedSalt |
500 |
GACTATGTAAACAACGC |
|
NAFlex_Prot-RNA-T2 |
NONE |
Rna |
A |
parmBSC0+OL3;amber14sb |
TIP3P |
RNA-A Single Stranded Naked TIP3P AddedSalt |
500 |
GGACAAGAUGCCUUAUGUGGACU |
|
NAFlex_Prot-RNA-T1 |
NONE |
Rna |
A |
parmBSC0+OL3;amber14sb |
TIP3P |
RNA-A Single Stranded Naked TIP3P AddedSalt |
450 |
GGACAAGAUGCCUUAUGUGGACU |
|
NAFlex_apsGGC |
NONE |
Dna |
Anti parallel triplex GGC |
parmBSC1 |
TIP3P |
DNA Triplex Naked ParmBSC1 TIP3P Electroneutral |
440 |
GGGGGGGGGG | CCCCCCCCCC | GGGGGGGGGG |
|
NAFlex_psATT |
NONE |
Dna |
parallel triplex ATT |
parmBSC1 |
TIP3P |
DNA Triplex Naked ParmBSC1 TIP3P Electroneutral |
440 |
AAAAAAAAAA | TTTTTTTTTT | TTTTTTTTTT |
|
NAFlex_psGGC |
NONE |
Dna |
parallel triplex GGC |
parmBSC1 |
TIP3P |
DNA Triplex Naked ParmBSC1 TIP3P Electroneutral |
440 |
GGGGGGGGGG | CCCCCCCCCC | GGGGGGGGGG |
|
NAFlex_QAPS |
156D |
Dna |
anti parallel quadruplex |
parmBSC1 |
TIP3P |
DNA Dimeric Quadruplex Telomeric Naked ParmBSC1 TIP3P Electroneutral |
440 |
GGGG | GGGG | GGGG | GGGG |
|
NAFlex_QPS |
352D |
Dna |
parallel quadruplex |
parmBSC1 |
TIP3P |
DNA Quadruplex Naked ParmBSC1 TIP3P Electroneutral Parallel |
440 |
GGGG | GGGG | GGGG | GGGG |
|
NAFlex_56merB |
NONE |
Dna |
B |
parmBSC1 |
TIP3P |
DNA-B Duplex Naked ParmBSC1 TIP3P AddedSalt |
440 |
CGCCGGCAGTAGCCGAAAAAATAGGCGCGCGCTCAAAAAAATGCCCCATGCCGCGC |
|
NAFlex_2af1-H-DNA |
2AF1 |
Dna |
H |
parmBSC1 |
TIP3P |
DNA-B Duplex Naked Hoogsteen ParmBSC1 TIP3P Electroneutral Overhanging-bases |
400 |
CGATATATATAT |
|
NAFlex_PYR |
NONE |
Dna |
DNA unfolding |
parmBSC1 |
TIP3P |
DNA Duplex Naked ParmBSC1 TIP3P Electroneutral |
400 |
GGCGCC |
|
NAFlex_colibactin1 |
NONE |
Dna |
B |
parmBSC1 |
TIP3P |
DNA-B Duplex Naked TIP3P Electroneutral |
400 |
CGCGAAAATTTTCGCG |
|
NAFlex_AT-rich_Na_25mM |
NONE |
Dna |
B |
parmBSC1 |
SPCE |
DNA-B Duplex Naked SPC/E AddedSalt |
400 |
TATGTATATT |
|
NAFlex_AT-rich_Lys_25mM |
NONE |
Dna |
B |
parmBSC1 |
SPCE |
DNA-B Duplex Naked SPC/E AddedSalt |
400 |
TATGTATATT |
|
NAFlex_AT-rich_Arg_25mM |
NONE |
Dna |
B |
parmBSC1 |
SPCE |
DNA-B Duplex Naked SPC/E AddedSalt |
400 |
TATGTATATT |
|
NAFlex_GC-rich_Arg_25mM |
NONE |
Dna |
B |
parmBSC1 |
SPCE |
DNA-B Duplex Naked SPC/E AddedSalt |
400 |
GTCCACGCCC |
|
NAFlex_GC-rich_Lys_25mM |
NONE |
Dna |
B |
parmBSC1 |
SPCE |
DNA-B Duplex Naked SPC/E AddedSalt |
400 |
GTCCACGCCC |
|
NAFlex_GC-rich_Na_25mM |
NONE |
Dna |
B |
parmBSC1 |
SPCE |
DNA-B Duplex Naked SPC/E AddedSalt |
400 |
GTCCACGCCC |
|
NAFlex_GC-rich_Na_500mM |
NONE |
Dna |
B |
parmBSC1 |
SPCE |
DNA-B Duplex Naked SPC/E AddedSalt |
400 |
GTCCACGCCC |
|
NAFlex_GC-rich_Arg_500mM |
NONE |
Dna |
B |
parmBSC1 |
SPCE |
DNA-B Duplex Naked SPC/E AddedSalt |
400 |
GTCCACGCCC |
|
NAFlex_GC-rich_Lys_500mM |
NONE |
Dna |
B |
parmBSC1 |
SPCE |
DNA-B Duplex Naked SPC/E AddedSalt |
400 |
GTCCACGCCC |
|
NAFlex_AT-rich_Lys_500mM |
NONE |
Dna |
B |
parmBSC1 |
SPCE |
DNA-B Duplex Naked SPC/E AddedSalt |
400 |
TATGTATATT |
|
NAFlex_AT-rich_Arg_500mM |
NONE |
Dna |
B |
parmBSC1 |
SPCE |
DNA-B Duplex Naked SPC/E AddedSalt |
400 |
TATGTATATT |
|
NAFlex_AT-rich_Na_500mM |
NONE |
Dna |
B |
parmBSC1 |
SPCE |
DNA-B Duplex Naked SPC/E AddedSalt |
400 |
TATGTATATT |
|
NAFlex_GC-rich_Na_1500mM |
NONE |
Dna |
B |
parmBSC1 |
SPCE |
DNA-B Duplex Naked SPC/E AddedSalt |
400 |
GTCCACGCCC |
|
NAFlex_AT-rich_Na_1500mM |
NONE |
Dna |
B |
parmBSC1 |
SPCE |
DNA-B Duplex Naked SPC/E AddedSalt |
400 |
TATGTATATT |
|
NAFlex_AT-rich_Arg_1500mM |
NONE |
Dna |
B |
parmBSC1 |
SPCE |
DNA-B Duplex Naked SPC/E AddedSalt |
400 |
TATGTATATT |
|
NAFlex_GC-rich_Arg_1500mM |
NONE |
Dna |
B |
parmBSC1 |
SPCE |
DNA-B Duplex Naked SPC/E AddedSalt |
400 |
GTCCACGCCC |
|
NAFlex_GC-rich_Lys_1500mM |
NONE |
Dna |
B |
parmBSC1 |
SPCE |
DNA-B Duplex Naked SPC/E AddedSalt |
400 |
GTCCACGCCC |
|
NAFlex_AT-rich_Lys_1500mM |
NONE |
Dna |
B |
parmBSC1 |
SPCE |
DNA-B Duplex Naked SPC/E AddedSalt |
400 |
TATGTATATT |
|
NAFlex_Z-DNA-0M |
1I0T |
Dna |
Z |
parmBSC1 |
TIP3P |
DNA-Z Duplex Naked ParmBSC1 TIP3P Electroneutral |
385 |
CGCGCGCGCG |
|
NAFlex_56merA |
NONE |
Dna |
B |
parmBSC1 |
TIP3P |
DNA-B Duplex Naked ParmBSC1 TIP3P AddedSalt |
360 |
CGCCGGCAGTAGCCGAAAAAATAGGCGCGCGCTCAAAAAAATGCCCCATGCCGCGC |
|
NAFlex_36merSPCE |
NONE |
Dna |
B |
parmBSC1 |
SPCE |
DNA-B Duplex Naked ParmBSC1 SPC/E Electroneutral |
300 |
CGCGATTGCCTAACGAGTACTCGTTAGGCAATCGCG |
|
NAFlex_36merTIP3P |
NONE |
Dna |
B |
parmBSC1 |
TIP3P |
DNA-B Duplex Naked ParmBSC1 TIP3P Electroneutral |
300 |
CGCGATTGCCTAACGAGTACTCGTTAGGCAATCGCG |
|
NAFlex_56merSeq2 |
NONE |
Dna |
B |
parmBSC1 |
TIP3P |
DNA-B Duplex Naked Parm99 TIP3P Electroneutral |
300 |
CGTGGCGGCAGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGCG |
|
NAFlex_56merSPCE |
NONE |
Dna |
B |
parmBSC1 |
SPCE |
DNA-B Duplex Naked ParmBSC1 SPC/E Electroneutral |
290 |
CGCGATTGCCTAACGGACAGGCATAGACGTCTATGCCTGTCCGTTAGGCAATCGCG |
|
NAFlex_ACGThmet |
NONE |
Dna |
B |
parmBSC1 |
TIP3P |
DNA-B Duplex Naked Parm99 TIP3P AddedSalt |
250 |
CGCGAXGTCGCG |
|
NAFlex_ACGTmet |
NONE |
Dna |
B |
parmBSC1 |
TIP3P |
DNA-B Duplex Naked Parm99 TIP3P AddedSalt |
250 |
CGCGAXGTCGCG |
|
NAFlex_rna2 |
NONE |
Rna |
A |
parmBSC0 |
TIP3P |
RNA-A Duplex Naked ParmBSC0 TIP3P Electroneutral |
250 |
CUAGGUGGAUGACUCAUU |
|
NAFlex_Naked_RNA_RNA |
NONE |
Rna |
A |
parmBSC1 |
SPCE |
RNA-A Duplex Naked SPC/E AddedSalt |
250 |
CGCGAA |
|
NAFlex_Naked_DNA_DNA |
NONE |
Dna |
B |
parmBSC1 |
SPCE |
DNA-B Duplex Naked SPC/E AddedSalt |
250 |
CGCGAA |
|
NAFlex_Naked_Sp |
NONE |
Rna |
A |
parmBSC1 |
SPCE |
-A Duplex Naked SPC/E AddedSalt |
250 |
CXXXXX |
|
NAFlex_Naked_SpRp |
NONE |
Rna |
A |
parmBSC1 |
SPCE |
-A Duplex Naked SPC/E AddedSalt |
250 |
CXXXXX |
|
NAFlex_Naked_RpSp |
NONE |
Rna |
A |
parmBSC1 |
SPCE |
-A Duplex Naked SPC/E AddedSalt |
250 |
CXXXXX |
|
NAFlex_Naked_Rp |
NONE |
Rna |
A |
parmBSC1 |
SPCE |
-A Duplex Naked SPC/E AddedSalt |
250 |
CXXXXX |
|
NAFlex_Naked_DNA_RNA |
NONE |
Rna |
B |
parmBSC1 |
SPCE |
-B Duplex Naked SPC/E AddedSalt |
250 |
CGCGAA |
|
NAFlex_apsAAT |
NONE |
Dna |
Anti parallel triplex AAT |
parmBSC1 |
TIP3P |
DNA Triplex Naked ParmBSC1 TIP3P Electroneutral |
240 |
AAAAAAAAAA | TTTTTTTTTT | AAAAAAAAAA |
|
NAFlex_ZDNA |
NONE |
Dna |
Z |
parmBSC1 |
TIP3P |
DNA-Z Duplex Naked ParmBSC1 TIP3P Electroneutral |
240 |
CGCGCGCGCG |
|
NAFlex_rna3 |
NONE |
Rna |
A |
parmBSC0 |
TIP3P |
RNA-A Duplex Naked ParmBSC0 TIP3P Electroneutral |
202 |
CACGGAACCGGUUCCGUC |
|
NAFlex_rna4 |
NONE |
Rna |
A |
parmBSC0 |
TIP3P |
RNA-A Duplex Naked ParmBSC0 TIP3P Electroneutral |
201 |
GGCGCGCACCACGCGCGG |
|
NAFlex_1fzx |
1FZX |
Dna |
B |
parmBSC1 |
TIP3P |
DNA-B Duplex Naked ParmBSC1 TIP3P Electroneutral A-track |
200 |
GGCAAAAAACGG |
|
NAFlex_1sk5 |
1SK5 |
Dna |
B |
parmBSC1 |
TIP3P |
DNA-B Duplex Naked ParmBSC1 TIP3P Electroneutral A-track |
200 |
CTTTTAAAAG |
|
NAFlex_1vt5 |
1VT5 |
Dna |
A |
parmBSC1 |
TIP3P |
DNA-A Duplex Naked ParmBSC1 TIP3P Electroneutral |
200 |
CCCCGGGG |
|
NAFlex_440d |
440D |
Dna |
A |
parmBSC1 |
TIP3P |
DNA-A Duplex Naked ParmBSC1 TIP3P Electroneutral |
200 |
AGGGGCCCCT |
|
NAFlex_rna1 |
NONE |
Rna |
A |
parmBSC0 |
TIP3P |
RNA-A Duplex Naked ParmBSC0 TIP3P Electroneutral |
200 |
GCCUAUAAACGCCUAUAA |
|
NAFlex_1rvh |
1RVH |
Dna |
B |
parmBSC1 |
TIP3P |
DNA-B ParmBSC1 PhysiologicalTemp TIP3P Electroneutral Dang Duplex |
200 |
GCAAAATTTTGC |
|
NAFlex_A-Ethanol |
1BNA |
Dna |
A (in ethanol) |
parmBSC1 |
Wat-Ethanol |
DNA-A Duplex Naked ParmBSC1 Water-Ethanol Electroneutral |
200 |
CGCGAATTCGCG |
|
NAFlex_1d89 |
1D89 |
Dna |
B |
parmBSC1 |
TIP3P |
DNA-B Duplex Naked ParmBSC1 TIP3P Electroneutral |
200 |
CGCGAAAAAACG |
|
NAFlex_CG_OG1 |
- |
Dna |
B |
parmBSC1 |
TIP3P |
-B Duplex Naked TIP3P Electroneutral |
200 |
XXXXXXXXGGAGAATCCCGGTGCCGAGGCCGCTCAATTGGTCGTAGACAGCTCTAGCACCGCTCXAACGCACGCXCGCGCTGTCCXCCGCGTTTCXACCGCCAAGGGGATTACTCCCTAGTCTCCAGGCACGTGTCAGATATATACATC |
|
NAFlex_CG_OG2 |
- |
Dna |
B |
parmBSC1 |
TIP3P |
-B Duplex Naked TIP3P Electroneutral |
200 |
XXXXXXXXGGAGAATCCCGGTGCCGAGGCCGCTCAATTGGTCGTAGACAGCTCTAGCACXGCTTAAACCXACGTACGCGCXGTCCCCCGCXTTTTAACCGCCAAGGGGATTACTCCCTAGTCTCCAGGCACGTGTCAGATATATACATC |
|
NAFlex_CG_5hmC1 |
- |
Dna |
B |
parmBSC1 |
TIP3P |
-B Duplex Naked TIP3P Electroneutral |
200 |
XXXXXXXXGGAGAATCCCGGTGCCGAGGCCGCTCAATTGGTCGTAGACAGCTCTAGCACCGCTXGAACGCACGXGCGCGCTGTCXGCCGCGTTTXGACCGCCAAGGGGATTACTCCCTAGTCTCCAGGCACGTGTCAGATATATACATC |
|
NAFlex_CG_5hmC2 |
- |
Dna |
B |
parmBSC1 |
TIP3P |
-B Duplex Naked TIP3P Electroneutral |
200 |
XXXXXXXXGGAGAATCCCGGTGCCGAGGCCGCTCAATTGGTCGTAGACAGCTCTAGCAXGGCTTAAACXGACGTACGCGXGGTCCCCCGXGTTTTAACCGCCAAGGGGATTACTCCCTAGTCTCCAGGCACGTGTCAGATATATACATC |
|
NAFlex_CG_5mC1 |
- |
Dna |
B |
parmBSC1 |
TIP3P |
-B Duplex Naked TIP3P Electroneutral |
200 |
XXXXXXXXGGAGAATCCCGGTGCCGAGGCCGCTCAATTGGTCGTAGACAGCTCTAGCACCGCTXGAACGCACGXGCGCGCTGTCXGCCGCGTTTXGACCGCCAAGGGGATTACTCCCTAGTCTCCAGGCACGTGTCAGATATATACATC |
|
NAFlex_CG_5mC2 |
- |
Dna |
B |
parmBSC1 |
TIP3P |
-B Duplex Naked TIP3P Electroneutral |
200 |
XXXXXXXXGGAGAATCCCGGTGCCGAGGCCGCTCAATTGGTCGTAGACAGCTCTAGCAXGGCTTAAACXGACGTACGCGXGGTCCCCCGXGTTTTAACCGCCAAGGGGATTACTCCCTAGTCTCCAGGCACGTGTCAGATATATACATC |
|
NAFlex_CG_noalch1 |
- |
Dna |
B |
parmBSC1 |
TIP3P |
-B Duplex Naked TIP3P Electroneutral |
200 |
XXXXXXXXGGAGAATCCCGGTGCCGAGGCCGCTCAATTGGTCGTAGACAGCTCTAGCACCGCTCGAACGCACGCGCGCGCTGTCCGCCGCGTTTCGACCGCCAAGGGGATTACTCCCTAGTCTCCAGGCACGTGTCAGATATATACATC |
|
NAFlex_CG_noalch2 |
- |
Dna |
B |
parmBSC1 |
TIP3P |
-B Duplex Naked TIP3P Electroneutral |
200 |
XXXXXXXXGGAGAATCCCGGTGCCGAGGCCGCTCAATTGGTCGTAGACAGCTCTAGCACGGCTTAAACCGACGTACGCGCGGTCCCCCGCGTTTTAACCGCCAAGGGGATTACTCCCTAGTCTCCAGGCACGTGTCAGATATATACATC |
|
NAFlex_TT_DZ1 |
- |
Dna |
B |
parmBSC1 |
TIP3P |
-B Duplex Naked TIP3P Electroneutral |
200 |
XXXXXXXXGGAGAATCCCGGTGCCGAGGCCGCTCAATTGGTCGTAGACAGCTCTAGCACCGCTXTAACGCACGXTCGCGCTGTCXTCCGCGTTTXTACCGCCAAGGGGATTACTCCCTAGTCTCCAGGCACGTGTCAGATATATACATC |
|
NAFlex_TT_DZ2 |
- |
Dna |
B |
parmBSC1 |
TIP3P |
-B Duplex Naked TIP3P Electroneutral |
200 |
XXXXXXXXGGAGAATCCCGGTGCCGAGGCCGCTCAATTGGTCGTAGACAGCTCTAGCAXTGCTTAAACXTACGTAC |
|
NAFlex_TT_PP1 |
- |
Dna |
B |
parmBSC1 |
TIP3P |
-B Duplex Naked TIP3P Electroneutral |
200 |
XXXXXXXXGGAGAATCCCGGTGCCGAGGCCGCTCAATTGGTCGTAGACAGCTCTAGCACCGCTXXAACGCACGXXCGCGCTGTCXXCCGCGTTTXXACCGCCAAGGGGATTACTCCCTAGTCTCCAGGCACGTGTCAGATATATACATC |
|
NAFlex_TT_PP2 |
- |
Dna |
B |
parmBSC1 |
TIP3P |
-B Duplex Naked TIP3P Electroneutral |
200 |
XXXXXXXXGGAGAATCCCGGTGCCGAGGCCGCTCAATTGGTCGTAGACAGCTCTAGCAXXGCTTAAACXXACGTACGCGXXGTCCCCCGXXTTTTAACCGCCAAGGGGATTACTCCCTAGTCTCCAGGCACGTGTCAGATATATACATC |
|
NAFlex_TT_SSB1 |
- |
Dna |
B |
parmBSC1 |
TIP3P |
-B Duplex Naked TIP3P Electroneutral |
200 |
XXXXXXXXGGAGAATCCCGGTGCCGAGGCCGCTCAATTGGTCGTAGACAGCTCTAGCACCGCTXTAACGCACGXTCGCGCTGTCXTCCGCGTTTXTACCGCCAAGGGGATTACTCCCTAGTCTCCAGGCACGTGTCAGATATATACATC |
|
NAFlex_TT_SSB2 |
- |
Dna |
B |
parmBSC1 |
TIP3P |
-B Duplex Naked TIP3P Electroneutral |
200 |
XXXXXXXXGGAGAATCCCGGTGCCGAGGCCGCTCAATTGGTCGTAGACAGCTCTAGCAXTGCTTAAACXTACGTACGCGXTGTCCCCCGXTTTTTAACCGCCAAGGGGATTACTCCCTAGTCTCCAGGCACGTGTCAGATATATACATC |
|
NAFlex_TT_TG1 |
- |
Dna |
B |
parmBSC1 |
TIP3P |
-B Duplex Naked TIP3P Electroneutral |
200 |
XXXXXXXXGGAGAATCCCGGTGCCGAGGCCGCTCAATTGGTCGTAGACAGCTCTAGCACCGCTXTAACGCACGXTCGCGCTGTCXTCCGCGTTTXTACCGCCAAGGGGATTACTCCCTAGTCTCCAGGCACGTGTCAGATATATACATC |
|
NAFlex_TT_TT1 |
- |
Dna |
B |
parmBSC1 |
TIP3P |
-B Duplex Naked TIP3P Electroneutral |
200 |
XXXXXXXXGGAGAATCCCGGTGCCGAGGCCGCTCAATTGGTCGTAGACAGCTCTAGCACCGCTXXAACGCACGXXCGCGCTGTCXXCCGCGTTTXXACCGCCAAGGGGATTACTCCCTAGTCTCCAGGCACGTGTCAGATATATACATC |
|
NAFlex_TT_TT2 |
- |
Dna |
B |
parmBSC1 |
TIP3P |
-B Duplex Naked TIP3P Electroneutral |
200 |
XXXXXXXXGGAGAATCCCGGTGCCGAGGCCGCTCAATTGGTCGTAGACAGCTCTAGCAXXGCTTAAACXXACGTACGCGXXGTCCCCCGXXTTTTAACCGCCAAGGGGATTACTCCCTAGTCTCCAGGCACGTGTCAGATATATACATC |
|
NAFlex_TT_noalch1 |
- |
Dna |
B |
parmBSC1 |
TIP3P |
-B Duplex Naked TIP3P Electroneutral |
200 |
XXXXXXXXGGAGAATCCCGGTGCCGAGGCCGCTCAATTGGTCGTAGACAGCTCTAGCACCGCTXTAACGCACGXTCGCGCTGTCXTCCGCGTTTXTACCGCCAAGGGGATTACTCCCTAGTCTCCAGGCACGTGTCAGATATATACATC |
|
NAFlex_TT_noalch2 |
- |
Dna |
B |
parmBSC1 |
TIP3P |
-B Duplex Naked TIP3P Electroneutral |
200 |
XXXXXXXXGGAGAATCCCGGTGCCGAGGCCGCTCAATTGGTCGTAGACAGCTCTAGCAXTGCTTAAACXTACGTAC |
|
NAFlex_TF_1a3q_16_dna_wholeA |
- |
Dna |
B |
parmBSC1 |
TIP3P |
DNA-B Duplex Naked TIP3P Electroneutral |
200 |
GGGGATTCCCCTA |
|
NAFlex_TF_1a3q_16_dna_wholeB |
- |
Dna |
B |
parmBSC1 |
TIP3P |
DNA-B Duplex Naked TIP3P Electroneutral |
200 |
GGGGATTCCCCTA |
|
NAFlex_TF_1a3q_17_dna_wholeA |
- |
Dna |
B |
parmBSC1 |
TIP3P |
DNA-B Duplex Naked TIP3P Electroneutral |
200 |
GGGGATTCCCCTA |
|
NAFlex_TF_1a3q_17_dna_wholeB |
- |
Dna |
B |
parmBSC1 |
TIP3P |
DNA-B Duplex Naked TIP3P Electroneutral |
200 |
GGGGATTCCCCTA |
|
NAFlex_TF_1a3q_18_dna_wholeA |
- |
Dna |
B |
parmBSC1 |
TIP3P |
DNA-B Duplex Naked TIP3P Electroneutral |
200 |
GGGGATTCCCCTA |
|
NAFlex_TF_1a3q_18_dna_wholeB |
- |
Dna |
B |
parmBSC1 |
TIP3P |
DNA-B Duplex Naked TIP3P Electroneutral |
200 |
GGGGATTCCCCTA |
|
NAFlex_TF_1a3q_19_dna_wholeA |
- |
Dna |
B |
parmBSC1 |
TIP3P |
DNA-B Duplex Naked TIP3P Electroneutral |
200 |
GGGGATTCCCCTA |
|
NAFlex_TF_1a3q_19_dna_wholeB |
- |
Dna |
B |
parmBSC1 |
TIP3P |
DNA-B Duplex Naked TIP3P Electroneutral |
200 |
GGGGATTCCCCTA |
|
NAFlex_gcf1p_1pro_1 |
1PRO |
Prot-Dna |
B |
parmBSC1 |
TIP3P |
-B Duplex Naked TIP3P Electroneutral |
200 |
TATATAATATAATATATATATATATAAA |
|
NAFlex_TF_1hlv_16_dna_wholeA |
- |
Dna |
B |
parmBSC1 |
TIP3P |
DNA-B Duplex Naked TIP3P Electroneutral |
200 |
GCCTTCGTTGGATGCXGGATT |
|
NAFlex_TF_1hlv_16_dna_wholeB |
- |
Dna |
B |
parmBSC1 |
TIP3P |
DNA-B Duplex Naked TIP3P Electroneutral |
200 |
GCCTTCGTTGGATGCXGGATT |
|
NAFlex_TF_1hlv_17_dna_wholeA |
- |
Dna |
B |
parmBSC1 |
TIP3P |
DNA-B Duplex Naked TIP3P Electroneutral |
200 |
GCCTTCGTTGGATGCGXGATT |
|
NAFlex_TF_1hlv_17_dna_wholeB |
- |
Dna |
B |
parmBSC1 |
TIP3P |
DNA-B Duplex Naked TIP3P Electroneutral |
200 |
GCCTTCGTTGGATGCGXGATT |
|
NAFlex_TF_1hlv_18_dna_wholeA |
- |
Dna |
B |
parmBSC1 |
TIP3P |
DNA-B Duplex Naked TIP3P Electroneutral |
200 |
GCCTTCGTTGGATGCGGXATT |
|
NAFlex_TF_1hlv_18_dna_wholeB |
- |
Dna |
B |
parmBSC1 |
TIP3P |
DNA-B Duplex Naked TIP3P Electroneutral |
200 |
GCCTTCGTTGGATGCGGXATT |
|
NAFlex_TF_1le5_16_dna_wholeA |
- |
Dna |
B |
parmBSC1 |
TIP3P |
DNA-B Duplex Naked TIP3P Electroneutral |
200 |
AGCGGAAATTCCCG |
|
NAFlex_TF_1le5_16_dna_wholeB |
- |
Dna |
B |
parmBSC1 |
TIP3P |
DNA-B Duplex Naked TIP3P Electroneutral |
200 |
AGCGGAAATTCCCG |
|
NAFlex_TF_1nfk_13_dna_wholeA |
- |
Dna |
B |
parmBSC1 |
TIP3P |
DNA-B Duplex Naked TIP3P Electroneutral |
200 |
GGGAATCCCCA |
|
NAFlex_TF_1nfk_13_dna_wholeB |
- |
Dna |
B |
parmBSC1 |
TIP3P |
DNA-B Duplex Naked TIP3P Electroneutral |
200 |
GGGAATCCCCA |
|
NAFlex_TF_1nfk_14_dna_wholeA |
- |
Dna |
B |
parmBSC1 |
TIP3P |
DNA-B Duplex Naked TIP3P Electroneutral |
200 |
GGGAATCCCCA |
|
NAFlex_TF_1nfk_14_dna_wholeB |
- |
Dna |
B |
parmBSC1 |
TIP3P |
DNA-B Duplex Naked TIP3P Electroneutral |
200 |
GGGAATCCCCA |
|
NAFlex_TF_1nfk_15_dna_wholeA |
- |
Dna |
B |
parmBSC1 |
TIP3P |
DNA-B Duplex Naked TIP3P Electroneutral |
200 |
GGGAATCCCCA |
|
NAFlex_TF_1nfk_15_dna_wholeB |
- |
Dna |
B |
parmBSC1 |
TIP3P |
DNA-B Duplex Naked TIP3P Electroneutral |
200 |
GGGAATCCCCA |
|
NAFlex_TF_1nfk_16_dna_wholeA |
- |
Dna |
B |
parmBSC1 |
TIP3P |
DNA-B Duplex Naked TIP3P Electroneutral |
200 |
GGGAATCCCCA |
|
NAFlex_TF_1nfk_16_dna_wholeB |
- |
Dna |
B |
parmBSC1 |
TIP3P |
DNA-B Duplex Naked TIP3P Electroneutral |
200 |
GGGAATCCCCA |
|
NAFlex_TF_2ac0_2_dna_wholeA |
- |
Dna |
B |
parmBSC1 |
TIP3P |
DNA-B Duplex Naked TIP3P Electroneutral |
200 |
CXGGCATGCCCG |
|
NAFlex_TF_2ac0_2_dna_wholeB |
- |
Dna |
B |
parmBSC1 |
TIP3P |
DNA-B Duplex Naked TIP3P Electroneutral |
200 |
CXGGCATGCCCG |
|
NAFlex_TF_2ac0_3_dna_wholeA |
- |
Dna |
B |
parmBSC1 |
TIP3P |
DNA-B Duplex Naked TIP3P Electroneutral |
200 |
CGXGCATGCCCG |
|
NAFlex_TF_2ac0_3_dna_wholeB |
- |
Dna |
B |
parmBSC1 |
TIP3P |
DNA-B Duplex Naked TIP3P Electroneutral |
200 |
CGXGCATGCCCG |
|
NAFlex_TF_2ac0_4_dna_wholeA |
- |
Dna |
B |
parmBSC1 |
TIP3P |
DNA-B Duplex Naked TIP3P Electroneutral |
200 |
CGGXCATGCCCG |
|
NAFlex_TF_2ac0_4_dna_wholeB |
- |
Dna |
B |
parmBSC1 |
TIP3P |
DNA-B Duplex Naked TIP3P Electroneutral |
200 |
CGGXCATGCCCG |
|
NAFlex_TF_2ko0_10_dna_wholeA |
- |
Dna |
B |
parmBSC1 |
TIP3P |
DNA-B Duplex Naked TIP3P Electroneutral |
200 |
GCTTGTGTGXGCAGCG |
|
NAFlex_TF_2ko0_10_dna_wholeB |
- |
Dna |
B |
parmBSC1 |
TIP3P |
DNA-B Duplex Naked TIP3P Electroneutral |
200 |
GCTTGTGTGXGCAGCG |
|
NAFlex_TF_2ko0_11_dna_wholeA |
- |
Dna |
B |
parmBSC1 |
TIP3P |
DNA-B Duplex Naked TIP3P Electroneutral |
200 |
GCTTGTGTGGXCAGCG |
|
NAFlex_TF_2ko0_11_dna_wholeB |
- |
Dna |
B |
parmBSC1 |
TIP3P |
DNA-B Duplex Naked TIP3P Electroneutral |
200 |
GCTTGTGTGGXCAGCG |
|
NAFlex_TF_2ko0_9_dna_wholeA |
- |
Dna |
B |
parmBSC1 |
TIP3P |
DNA-B Duplex Naked TIP3P Electroneutral |
200 |
GCTTGTGTXGGCAGCG |
|
NAFlex_TF_2ko0_9_dna_wholeB |
- |
Dna |
B |
parmBSC1 |
TIP3P |
DNA-B Duplex Naked TIP3P Electroneutral |
200 |
GCTTGTGTXGGCAGCG |
|
NAFlex_TF_3mlp_13_dna_wholeA |
- |
Dna |
B |
parmBSC1 |
TIP3P |
DNA-B Duplex Naked TIP3P Electroneutral |
200 |
CTTTATTCCCATXGGAATAAAG |
|
NAFlex_TF_3mlp_13_dna_wholeB |
- |
Dna |
B |
parmBSC1 |
TIP3P |
DNA-B Duplex Naked TIP3P Electroneutral |
200 |
CTTTATTCCCATXGGAATAAAG |
|
NAFlex_TF_3mlp_14_dna_wholeA |
- |
Dna |
B |
parmBSC1 |
TIP3P |
DNA-B Duplex Naked TIP3P Electroneutral |
200 |
CTTTATTCCCATGXGAATAAAG |
|
NAFlex_TF_3mlp_14_dna_wholeB |
- |
Dna |
B |
parmBSC1 |
TIP3P |
DNA-B Duplex Naked TIP3P Electroneutral |
200 |
CTTTATTCCCATGXGAATAAAG |
|
NAFlex_TF_3mlp_15_dna_wholeA |
- |
Dna |
B |
parmBSC1 |
TIP3P |
DNA-B Duplex Naked TIP3P Electroneutral |
200 |
CTTTATTCCCATGGXAATAAAG |
|
NAFlex_TF_3mlp_15_dna_wholeB |
- |
Dna |
B |
parmBSC1 |
TIP3P |
DNA-B Duplex Naked TIP3P Electroneutral |
200 |
CTTTATTCCCATGGXAATAAAG |
|
NAFlex_TF_3v79_10_dna_wholeA |
- |
Dna |
B |
parmBSC1 |
TIP3P |
DNA-B Duplex Naked TIP3P Electroneutral |
200 |
GTTACTGTGXGAAAGAAA |
|
NAFlex_TF_3v79_10_dna_wholeB |
- |
Dna |
B |
parmBSC1 |
TIP3P |
DNA-B Duplex Naked TIP3P Electroneutral |
200 |
GTTACTGTGXGAAAGAAA |
|
NAFlex_TF_3v79_11_dna_wholeA |
- |
Dna |
B |
parmBSC1 |
TIP3P |
DNA-B Duplex Naked TIP3P Electroneutral |
200 |
GTTACTGTGGXAAAGAAA |
|
NAFlex_TF_3v79_11_dna_wholeB |
- |
Dna |
B |
parmBSC1 |
TIP3P |
DNA-B Duplex Naked TIP3P Electroneutral |
200 |
GTTACTGTGGXAAAGAAA |
|
NAFlex_TF_3v79_9_dna_wholeA |
- |
Dna |
B |
parmBSC1 |
TIP3P |
DNA-B Duplex Naked TIP3P Electroneutral |
200 |
GTTACTGTXGGAAAGAAA |
|
NAFlex_TF_3v79_9_dna_wholeB |
- |
Dna |
B |
parmBSC1 |
TIP3P |
DNA-B Duplex Naked TIP3P Electroneutral |
200 |
GTTACTGTXGGAAAGAAA |
|
NAFlex_TF_4cn5_2_dna_wholeA |
- |
Dna |
B |
parmBSC1 |
TIP3P |
DNA-B Duplex Naked TIP3P Electroneutral |
200 |
TXGGGTCAGAGT |
|
NAFlex_TF_4cn5_2_dna_wholeB |
- |
Dna |
B |
parmBSC1 |
TIP3P |
DNA-B Duplex Naked TIP3P Electroneutral |
200 |
TXGGGTCAGAGT |
|
NAFlex_TF_4cn5_3_dna_wholeA |
- |
Dna |
B |
parmBSC1 |
TIP3P |
DNA-B Duplex Naked TIP3P Electroneutral |
200 |
TGXGGTCAGAGT |
|
NAFlex_TF_4cn5_3_dna_wholeB |
- |
Dna |
B |
parmBSC1 |
TIP3P |
DNA-B Duplex Naked TIP3P Electroneutral |
200 |
TGXGGTCAGAGT |
|
NAFlex_TF_4cn5_4_dna_wholeA |
- |
Dna |
B |
parmBSC1 |
TIP3P |
DNA-B Duplex Naked TIP3P Electroneutral |
200 |
TGGXGTCAGAGT |
|
NAFlex_TF_4cn5_4_dna_wholeB |
- |
Dna |
B |
parmBSC1 |
TIP3P |
DNA-B Duplex Naked TIP3P Electroneutral |
200 |
TGGXGTCAGAGT |
|
NAFlex_TF_4cn5_5_dna_wholeA |
- |
Dna |
B |
parmBSC1 |
TIP3P |
DNA-B Duplex Naked TIP3P Electroneutral |
200 |
TGGGXTCAGAGT |
|
NAFlex_TF_4cn5_5_dna_wholeB |
- |
Dna |
B |
parmBSC1 |
TIP3P |
DNA-B Duplex Naked TIP3P Electroneutral |
200 |
TGGGXTCAGAGT |
|
NAFlex_TF_4m9e_2_dna_wholeA |
- |
Dna |
B |
parmBSC1 |
TIP3P |
DNA-B Duplex Naked TIP3P Electroneutral |
200 |
GXGGTGTGGC |
|
NAFlex_TF_4m9e_2_dna_wholeB |
- |
Dna |
B |
parmBSC1 |
TIP3P |
DNA-B Duplex Naked TIP3P Electroneutral |
200 |
GXGGTGTGGC |
|
NAFlex_TF_4m9e_3_dna_wholeA |
- |
Dna |
B |
parmBSC1 |
TIP3P |
DNA-B Duplex Naked TIP3P Electroneutral |
200 |
GGXGTGTGGC |
|
NAFlex_TF_4m9e_3_dna_wholeB |
- |
Dna |
B |
parmBSC1 |
TIP3P |
DNA-B Duplex Naked TIP3P Electroneutral |
200 |
GGXGTGTGGC |
|
NAFlex_TF_4m9e_4_dna_wholeA |
- |
Dna |
B |
parmBSC1 |
TIP3P |
DNA-B Duplex Naked TIP3P Electroneutral |
200 |
GGGXTGTGGC |
|
NAFlex_TF_4m9e_4_dna_wholeB |
- |
Dna |
B |
parmBSC1 |
TIP3P |
DNA-B Duplex Naked TIP3P Electroneutral |
200 |
GGGXTGTGGC |
|
NAFlex_TF_5e6b_14_dna_wholeA |
- |
Dna |
B |
parmBSC1 |
TIP3P |
DNA-B Duplex Naked TIP3P Electroneutral |
200 |
GGGAATTCCCCT |
|
NAFlex_TF_5e6b_14_dna_wholeB |
- |
Dna |
B |
parmBSC1 |
TIP3P |
DNA-B Duplex Naked TIP3P Electroneutral |
200 |
GGGAATTCCCCT |
|
NAFlex_TF_5e6b_15_dna_wholeA |
- |
Dna |
B |
parmBSC1 |
TIP3P |
DNA-B Duplex Naked TIP3P Electroneutral |
200 |
GGGAATTCCCCT |
|
NAFlex_TF_5e6b_15_dna_wholeB |
- |
Dna |
B |
parmBSC1 |
TIP3P |
DNA-B Duplex Naked TIP3P Electroneutral |
200 |
GGGAATTCCCCT |
|
NAFlex_TF_5e6b_16_dna_wholeA |
- |
Dna |
B |
parmBSC1 |
TIP3P |
DNA-B Duplex Naked TIP3P Electroneutral |
200 |
GGGAATTCCCCT |
|
NAFlex_TF_5e6b_16_dna_wholeB |
- |
Dna |
B |
parmBSC1 |
TIP3P |
DNA-B Duplex Naked TIP3P Electroneutral |
200 |
GGGAATTCCCCT |
|
NAFlex_TF_5e6b_17_dna_wholeA |
- |
Dna |
B |
parmBSC1 |
TIP3P |
DNA-B Duplex Naked TIP3P Electroneutral |
200 |
GGGAATTCCCCT |
|
NAFlex_TF_5e6b_17_dna_wholeB |
- |
Dna |
B |
parmBSC1 |
TIP3P |
DNA-B Duplex Naked TIP3P Electroneutral |
200 |
GGGAATTCCCCT |
|
NAFlex_TF_6f57_14_dna_wholeA |
- |
Dna |
B |
parmBSC1 |
TIP3P |
DNA-B Duplex Naked TIP3P Electroneutral |
200 |
AGAGCGCATG |
|
NAFlex_TF_6f57_14_dna_wholeB |
- |
Dna |
B |
parmBSC1 |
TIP3P |
DNA-B Duplex Naked TIP3P Electroneutral |
200 |
AGAGCGCATG |
|
NAFlex_TF_6f57_16_dna_wholeA |
- |
Dna |
B |
parmBSC1 |
TIP3P |
DNA-B Duplex Naked TIP3P Electroneutral |
200 |
AGAGCGCATG |
|
NAFlex_TF_6f57_16_dna_wholeB |
- |
Dna |
B |
parmBSC1 |
TIP3P |
DNA-B Duplex Naked TIP3P Electroneutral |
200 |
AGAGCGCATG |
|
NAFlex_TF_6f57_6_dna_wholeA |
- |
Dna |
B |
parmBSC1 |
TIP3P |
DNA-B Duplex Naked TIP3P Electroneutral |
200 |
AGAGCXCATG |
|
NAFlex_TF_6f57_6_dna_wholeB |
- |
Dna |
B |
parmBSC1 |
TIP3P |
DNA-B Duplex Naked TIP3P Electroneutral |
200 |
AGAGCXCATG |
|
NAFlex_TF_1a3q_16_wholeA |
- |
Prot |
B |
parmBSC1 |
TIP3P |
-B Duplex Naked TIP3P Electroneutral |
200 |
GGGGATTCCCCTA |
|
NAFlex_TF_1a3q_16_wholeB |
- |
Prot |
B |
parmBSC1 |
TIP3P |
-B Duplex Naked TIP3P Electroneutral |
200 |
GGGGATTCCCCTA |
|
NAFlex_TF_1a3q_17_wholeA |
- |
Prot |
B |
parmBSC1 |
TIP3P |
-B Duplex Naked TIP3P Electroneutral |
200 |
GGGGATTCCCCTA |
|
NAFlex_TF_1a3q_17_wholeB |
- |
Prot |
B |
parmBSC1 |
TIP3P |
-B Duplex Naked TIP3P Electroneutral |
200 |
GGGGATTCCCCTA |
|
NAFlex_TF_1a3q_18_wholeA |
- |
Prot |
B |
parmBSC1 |
TIP3P |
-B Duplex Naked TIP3P Electroneutral |
200 |
GGGGATTCCCCTA |
|
NAFlex_TF_1a3q_18_wholeB |
- |
Prot |
B |
parmBSC1 |
TIP3P |
-B Duplex Naked TIP3P Electroneutral |
200 |
GGGGATTCCCCTA |
|
NAFlex_TF_1a3q_19_wholeA |
- |
Prot |
B |
parmBSC1 |
TIP3P |
-B Duplex Naked TIP3P Electroneutral |
200 |
GGGGATTCCCCTA |
|
NAFlex_TF_1a3q_19_wholeB |
- |
Prot |
B |
parmBSC1 |
TIP3P |
-B Duplex Naked TIP3P Electroneutral |
200 |
GGGGATTCCCCTA |
|
NAFlex_TF_1hlv_16_wholeA |
- |
Prot |
B |
parmBSC1 |
TIP3P |
-B Duplex Naked TIP3P Electroneutral |
200 |
GCCTTCGTTGGATGCXGGATT |
|
NAFlex_TF_1hlv_16_wholeB |
- |
Prot |
B |
parmBSC1 |
TIP3P |
-B Duplex Naked TIP3P Electroneutral |
200 |
GCCTTCGTTGGATGCXGGATT |
|
NAFlex_TF_1hlv_17_wholeA |
- |
Prot |
B |
parmBSC1 |
TIP3P |
-B Duplex Naked TIP3P Electroneutral |
200 |
GCCTTCGTTGGATGCGXGATT |
|
NAFlex_TF_1hlv_17_wholeB |
- |
Prot |
B |
parmBSC1 |
TIP3P |
-B Duplex Naked TIP3P Electroneutral |
200 |
GCCTTCGTTGGATGCGXGATT |
|
NAFlex_TF_1hlv_18_wholeA |
- |
Prot |
B |
parmBSC1 |
TIP3P |
-B Duplex Naked TIP3P Electroneutral |
200 |
GCCTTCGTTGGATGCGGXATT |
|
NAFlex_TF_1hlv_18_wholeB |
- |
Prot |
B |
parmBSC1 |
TIP3P |
-B Duplex Naked TIP3P Electroneutral |
200 |
GCCTTCGTTGGATGCGGXATT |
|
NAFlex_TF_1le5_16_wholeA |
- |
Prot |
B |
parmBSC1 |
TIP3P |
-B Duplex Naked TIP3P Electroneutral |
200 |
AGCGGAAATTCCCG |
|
NAFlex_TF_1le5_16_wholeB |
- |
Prot |
B |
parmBSC1 |
TIP3P |
-B Duplex Naked TIP3P Electroneutral |
200 |
AGCGGAAATTCCCG |
|
NAFlex_TF_1le5_17_wholeA |
- |
Prot |
B |
parmBSC1 |
TIP3P |
-B Duplex Naked TIP3P Electroneutral |
200 |
AGCGGAAATTCCCG |
|
NAFlex_TF_1nfk_13_wholeA |
- |
Prot |
B |
parmBSC1 |
TIP3P |
-B Duplex Naked TIP3P Electroneutral |
200 |
GGGAATCCCCA |
|
NAFlex_TF_1nfk_13_wholeB |
- |
Prot |
B |
parmBSC1 |
TIP3P |
-B Duplex Naked TIP3P Electroneutral |
200 |
GGGAATCCCCA |
|
NAFlex_TF_1nfk_14_wholeA |
- |
Prot |
B |
parmBSC1 |
TIP3P |
-B Duplex Naked TIP3P Electroneutral |
200 |
GGGAATCCCCA |
|
NAFlex_TF_1nfk_14_wholeB |
- |
Prot |
B |
parmBSC1 |
TIP3P |
-B Duplex Naked TIP3P Electroneutral |
200 |
GGGAATCCCCA |
|
NAFlex_TF_1nfk_15_wholeA |
- |
Prot |
B |
parmBSC1 |
TIP3P |
-B Duplex Naked TIP3P Electroneutral |
200 |
GGGAATCCCCA |
|
NAFlex_TF_1nfk_15_wholeB |
- |
Prot |
B |
parmBSC1 |
TIP3P |
-B Duplex Naked TIP3P Electroneutral |
200 |
GGGAATCCCCA |
|
NAFlex_TF_1nfk_16_wholeA |
- |
Prot |
B |
parmBSC1 |
TIP3P |
-B Duplex Naked TIP3P Electroneutral |
200 |
GGGAATCCCCA |
|
NAFlex_TF_1nfk_16_wholeB |
- |
Prot |
B |
parmBSC1 |
TIP3P |
-B Duplex Naked TIP3P Electroneutral |
200 |
GGGAATCCCCA |
|
NAFlex_TF_2ko0_10_wholeA |
- |
Prot |
B |
parmBSC1 |
TIP3P |
-B Duplex Naked TIP3P Electroneutral |
200 |
GCTTGTGTGXGCAGCG |
|
NAFlex_TF_2ko0_10_wholeB |
- |
Prot |
B |
parmBSC1 |
TIP3P |
-B Duplex Naked TIP3P Electroneutral |
200 |
GCTTGTGTGXGCAGCG |
|
NAFlex_TF_2ko0_11_wholeA |
- |
Prot |
B |
parmBSC1 |
TIP3P |
-B Duplex Naked TIP3P Electroneutral |
200 |
GCTTGTGTGGXCAGCG |
|
NAFlex_TF_2ko0_11_wholeB |
- |
Prot |
B |
parmBSC1 |
TIP3P |
-B Duplex Naked TIP3P Electroneutral |
200 |
GCTTGTGTGGXCAGCG |
|
NAFlex_TF_3mlp_13_wholeA |
- |
Prot |
B |
parmBSC1 |
TIP3P |
-B Duplex Naked TIP3P Electroneutral |
200 |
CTTTATTCCCATXGGAATAAAGC |
|
NAFlex_TF_3mlp_13_wholeB |
- |
Prot |
B |
parmBSC1 |
TIP3P |
-B Duplex Naked TIP3P Electroneutral |
200 |
CTTTATTCCCATXGGAATAAAGC |
|
NAFlex_TF_3mlp_14_wholeA |
- |
Prot |
B |
parmBSC1 |
TIP3P |
-B Duplex Naked TIP3P Electroneutral |
200 |
CTTTATTCCCATGXGAATAAAGC |
|
NAFlex_TF_3mlp_14_wholeB |
- |
Prot |
B |
parmBSC1 |
TIP3P |
-B Duplex Naked TIP3P Electroneutral |
200 |
CTTTATTCCCATGXGAATAAAGC |
|
NAFlex_TF_3mlp_15_wholeA |
- |
Prot |
B |
parmBSC1 |
TIP3P |
-B Duplex Naked TIP3P Electroneutral |
200 |
CTTTATTCCCATGGXAATAAAGC |
|
NAFlex_TF_3mlp_15_wholeB |
- |
Prot |
B |
parmBSC1 |
TIP3P |
-B Duplex Naked TIP3P Electroneutral |
200 |
CTTTATTCCCATGGXAATAAAGC |
|
NAFlex_TF_3v79_10_wholeA |
- |
Prot |
B |
parmBSC1 |
TIP3P |
-B Duplex Naked TIP3P Electroneutral |
200 |
GTTACTGTGXGAAAGAAA |
|
NAFlex_TF_3v79_10_wholeB |
- |
Prot |
B |
parmBSC1 |
TIP3P |
-B Duplex Naked TIP3P Electroneutral |
200 |
GTTACTGTGXGAAAGAAA |
|
NAFlex_TF_3v79_11_wholeA |
- |
Prot |
B |
parmBSC1 |
TIP3P |
-B Duplex Naked TIP3P Electroneutral |
200 |
GTTACTGTGGXAAAGAAA |
|
NAFlex_TF_3v79_11_wholeB |
- |
Prot |
B |
parmBSC1 |
TIP3P |
-B Duplex Naked TIP3P Electroneutral |
200 |
GTTACTGTGGXAAAGAAA |
|
NAFlex_TF_5e6b_14_wholeA |
- |
Prot |
B |
parmBSC1 |
TIP3P |
-B Duplex Naked TIP3P Electroneutral |
200 |
GGGAATTCCCCT |
|
NAFlex_TF_5e6b_14_wholeB |
- |
Prot |
B |
parmBSC1 |
TIP3P |
-B Duplex Naked TIP3P Electroneutral |
200 |
GGGAATTCCCCT |
|
NAFlex_TF_5e6b_15_wholeA |
- |
Prot |
B |
parmBSC1 |
TIP3P |
-B Duplex Naked TIP3P Electroneutral |
200 |
GGGAATTCCCCT |
|
NAFlex_TF_5e6b_15_wholeB |
- |
Prot |
B |
parmBSC1 |
TIP3P |
-B Duplex Naked TIP3P Electroneutral |
200 |
GGGAATTCCCCT |
|
NAFlex_TF_5e6b_16_wholeA |
- |
Prot |
B |
parmBSC1 |
TIP3P |
-B Duplex Naked TIP3P Electroneutral |
200 |
GGGAATTCCCCT |
|
NAFlex_TF_5e6b_16_wholeB |
- |
Prot |
B |
parmBSC1 |
TIP3P |
-B Duplex Naked TIP3P Electroneutral |
200 |
GGGAATTCCCCT |
|
NAFlex_TF_5e6b_17_wholeA |
- |
Prot |
B |
parmBSC1 |
TIP3P |
-B Duplex Naked TIP3P Electroneutral |
200 |
GGGAATTCCCCT |
|
NAFlex_TF_5e6b_17_wholeB |
- |
Prot |
B |
parmBSC1 |
TIP3P |
-B Duplex Naked TIP3P Electroneutral |
200 |
GGGAATTCCCCT |
|
NAFlex_TF_6f57_14_wholeA |
- |
Prot |
B |
parmBSC1 |
TIP3P |
-B Duplex Naked TIP3P Electroneutral |
200 |
AGAGCGCATG |
|
NAFlex_TF_6f57_14_wholeB |
- |
Prot |
B |
parmBSC1 |
TIP3P |
-B Duplex Naked TIP3P Electroneutral |
200 |
AGAGCGCATG |
|
NAFlex_TF_6f57_16_wholeA |
- |
Prot |
B |
parmBSC1 |
TIP3P |
-B Duplex Naked TIP3P Electroneutral |
200 |
AGAGCGCATG |
|
NAFlex_TF_6f57_16_wholeB |
- |
Prot |
B |
parmBSC1 |
TIP3P |
-B Duplex Naked TIP3P Electroneutral |
200 |
AGAGCGCATG |
|
NAFlex_TF_2ac0_2_wholeA |
- |
Prot |
B |
parmBSC1 |
TIP3P |
-B Duplex Naked TIP3P Electroneutral |
200 |
CXGGCATGCCCGC |
|
NAFlex_TF_2ac0_2_wholeB |
- |
Prot |
B |
parmBSC1 |
TIP3P |
-B Duplex Naked TIP3P Electroneutral |
200 |
CXGGCATGCCCGC |
|
NAFlex_TF_2ac0_3_wholeA |
- |
Prot |
B |
parmBSC1 |
TIP3P |
-B Duplex Naked TIP3P Electroneutral |
200 |
CGXGCATGCCCGC |
|
NAFlex_TF_2ac0_3_wholeB |
- |
Prot |
B |
parmBSC1 |
TIP3P |
-B Duplex Naked TIP3P Electroneutral |
200 |
CGXGCATGCCCGC |
|
NAFlex_TF_2ac0_4_wholeA |
- |
Prot |
B |
parmBSC1 |
TIP3P |
-B Duplex Naked TIP3P Electroneutral |
200 |
CGGXCATGCCCGC |
|
NAFlex_TF_2ac0_4_wholeB |
- |
Prot |
B |
parmBSC1 |
TIP3P |
-B Duplex Naked TIP3P Electroneutral |
200 |
CGGXCATGCCCGC |
|
NAFlex_TF_2ko0_9_wholeA |
- |
Prot |
B |
parmBSC1 |
TIP3P |
-B Duplex Naked TIP3P Electroneutral |
200 |
GCTTGTGTXGGCAGCG |
|
NAFlex_TF_2ko0_9_wholeB |
- |
Prot |
B |
parmBSC1 |
TIP3P |
-B Duplex Naked TIP3P Electroneutral |
200 |
GCTTGTGTXGGCAGCG |
|
NAFlex_TF_3v79_9_wholeA |
- |
Prot |
B |
parmBSC1 |
TIP3P |
-B Duplex Naked TIP3P Electroneutral |
200 |
GTTACTGTXGGAAAGAAA |
|
NAFlex_TF_3v79_9_wholeB |
- |
Prot |
B |
parmBSC1 |
TIP3P |
-B Duplex Naked TIP3P Electroneutral |
200 |
GTTACTGTXGGAAAGAAA |
|
NAFlex_TF_4cn5_2_wholeA |
- |
Prot |
B |
parmBSC1 |
TIP3P |
-B Duplex Naked TIP3P Electroneutral |
200 |
TXGGGTCAGAGTA |
|
NAFlex_TF_4cn5_2_wholeB |
- |
Prot |
B |
parmBSC1 |
TIP3P |
-B Duplex Naked TIP3P Electroneutral |
200 |
TXGGGTCAGAGTA |
|
NAFlex_TF_4cn5_3_wholeA |
- |
Prot |
B |
parmBSC1 |
TIP3P |
-B Duplex Naked TIP3P Electroneutral |
200 |
TGXGGTCAGAGTA |
|
NAFlex_TF_4cn5_3_wholeB |
- |
Prot |
B |
parmBSC1 |
TIP3P |
-B Duplex Naked TIP3P Electroneutral |
200 |
TGXGGTCAGAGTA |
|
NAFlex_TF_4cn5_4_wholeA |
- |
Prot |
B |
parmBSC1 |
TIP3P |
-B Duplex Naked TIP3P Electroneutral |
200 |
TGGXGTCAGAGTA |
|
NAFlex_TF_4cn5_4_wholeB |
- |
Prot |
B |
parmBSC1 |
TIP3P |
-B Duplex Naked TIP3P Electroneutral |
200 |
TGGXGTCAGAGTA |
|
NAFlex_TF_4cn5_5_wholeA |
- |
Prot |
B |
parmBSC1 |
TIP3P |
-B Duplex Naked TIP3P Electroneutral |
200 |
TGGGXTCAGAGTA |
|
NAFlex_TF_4cn5_5_wholeB |
- |
Prot |
B |
parmBSC1 |
TIP3P |
-B Duplex Naked TIP3P Electroneutral |
200 |
TGGGXTCAGAGTA |
|
NAFlex_TF_4m9e_2_wholeA |
- |
Prot |
B |
parmBSC1 |
TIP3P |
-B Duplex Naked TIP3P Electroneutral |
200 |
GXGGTGTGGCG |
|
NAFlex_TF_4m9e_2_wholeB |
- |
Prot |
B |
parmBSC1 |
TIP3P |
-B Duplex Naked TIP3P Electroneutral |
200 |
GXGGTGTGGCG |
|
NAFlex_TF_4m9e_3_wholeA |
- |
Prot |
B |
parmBSC1 |
TIP3P |
-B Duplex Naked TIP3P Electroneutral |
200 |
GGXGTGTGGCG |
|
NAFlex_TF_4m9e_3_wholeB |
- |
Prot |
B |
parmBSC1 |
TIP3P |
-B Duplex Naked TIP3P Electroneutral |
200 |
GGXGTGTGGCG |
|
NAFlex_TF_4m9e_4_wholeA |
- |
Prot |
B |
parmBSC1 |
TIP3P |
-B Duplex Naked TIP3P Electroneutral |
200 |
GGGXTGTGGCG |
|
NAFlex_TF_4m9e_4_wholeB |
- |
Prot |
B |
parmBSC1 |
TIP3P |
-B Duplex Naked TIP3P Electroneutral |
200 |
GGGXTGTGGCG |
|
NAFlex_TF_6f57_6_wholeA |
- |
Prot |
B |
parmBSC1 |
TIP3P |
-B Duplex Naked TIP3P Electroneutral |
200 |
AGAGCXCATG |
|
NAFlex_TF_6f57_6_wholeB |
- |
Prot |
B |
parmBSC1 |
TIP3P |
-B Duplex Naked TIP3P Electroneutral |
200 |
AGAGCXCATG |
|
NAFlex_gcf1p_2pro_1dna |
1PRO |
Prot-Dna |
B |
parmBSC1 |
TIP3P |
-B Duplex Naked TIP3P Electroneutral |
200 |
ATATAAATATATTATATATATAATATAATATATAT |
|
NAFlex_gcf1p_2pro_2dna |
1PRO |
Prot-Dna |
B |
parmBSC1 |
TIP3P |
-B Duplex Naked TIP3P Electroneutral |
200 |
ATAATAAATTATATAATATAATATATATATATATA | TATATATATATATATTA |
|
NAFlex_gcf1p_4pro_4dna |
1PRO |
Prot-Dna |
B |
parmBSC1 |
TIP3P |
-B Duplex Naked TIP3P Electroneutral |
200 |
TATATTATATAATTTATTAT | ATAATAAATTATATAATATA | TATATTATATAATTTATTAT | ATAATAAATT |
|
NAFlex_v100t9 |
NONE |
Dna |
B |
parmBSC1 |
TIP3P |
DNA-B Duplex Naked Parm99 TIP3P AddedSalt |
100 |
ATCTTGGCAGTTAATCGAACAAGACCCGTGCAATGCTATCGACATCAAGGCCTATCGTTACGGGGTTGGGAGTCAATGGGTTCAGGATGCAGGTGAGGAT |
|
NAFlex_v106Bt10 |
NONE |
Dna |
B |
parmBSC1 |
TIP3P |
DNA-B Duplex Naked Parm99 TIP3P AddedSalt |
100 |
TGCGGCAGTTAATCGAACAAGACCCGTGCAATGCTATCGACATCAAGGCCTATCGCTATTACGGGGTTGGGAGTCAATGGGTTCAGGATGCAGGTGAGGATATCTT |
|
NAFlex_v106Ct10 |
NONE |
Dna |
B |
parmBSC1 |
TIP3P |
DNA-B Duplex Naked Parm99 TIP3P AddedSalt |
100 |
GAGGATATCTTTGCGGCAGTTAATCGAACAAGACCCGTGCAATGCTATCGACATCAAGGCCTATCGCTATTACGGGGTTGGGAGTCAATGGGTTCAGGATGCAGGT |
|
NAFlex_v106R2t10 |
NONE |
Dna |
B |
parmBSC1 |
TIP3P |
DNA-B Duplex Naked Parm99 TIP3P AddedSalt |
100 |
ATCTTTGCGGCAGTTAATCGAACAAGACCCGTGCAATGCTATCGACATCAAGGCCTATCGCTATTACGGGGTTGGGAGTCAATGGGTTCAGGATGCAGGTGAGGAT |
|
NAFlex_v106R3t10 |
NONE |
Dna |
B |
parmBSC1 |
TIP3P |
DNA-B Duplex Naked Parm99 TIP3P AddedSalt |
100 |
ATCTTTGCGGCAGTTAATCGAACAAGACCCGTGCAATGCTATCGACATCAAGGCCTATCGCTATTACGGGGTTGGGAGTCAATGGGTTCAGGATGCAGGTGAGGAT |
|
NAFlex_v106t10 |
NONE |
Dna |
B |
parmBSC1 |
TIP3P |
DNA-B Duplex Naked Parm99 TIP3P AddedSalt |
100 |
ATCTTTGCGGCAGTTAATCGAACAAGACCCGTGCAATGCTATCGACATCAAGGCCTATCGCTATTACGGGGTTGGGAGTCAATGGGTTCAGGATGCAGGTGAGGAT |
|
NAFlex_DDD_GMX_CPU |
1NAJ |
Dna |
B |
parmBSC1 |
TIP3P |
DNA-B Duplex Naked DDD ParmBSC1 TIP3P Electroneutral |
100 |
CGCGAATTCGCG |
|
NAFlex_DDD_GMX_GPU |
1NAJ |
Dna |
B |
parmBSC1 |
TIP3P |
DNA-B Duplex Naked DDD ParmBSC1 TIP3P Electroneutral |
100 |
CGCGAATTCGCG |
|
NAFlex_DDD_Amber_CPU |
1NAJ |
Dna |
B |
parmBSC1 |
TIP3P |
DNA-B Duplex Naked DDD ParmBSC1 TIP3P Electroneutral |
100 |
CGCGAATTCGCG |
|
NAFlex_DDD_Amber_GPU |
1NAJ |
Dna |
B |
parmBSC1 |
TIP3P |
DNA-B Duplex Naked DDD ParmBSC1 TIP3P Electroneutral |
100 |
CGCGAATTCGCG |
|
NAFlex_v106t9 |
NONE |
Dna |
B |
parmBSC1 |
TIP3P |
DNA-B Duplex Naked Parm99 TIP3P AddedSalt |
50 |
ATCTTTGCGGCAGTTAATCGAACAAGACCCGTGCAATGCTATCGACATCAAGGCCTATCGCTATTACGGGGTTGGGAGTCAATGGGTTCAGGATGCAGGTGAGGAT |
|
NAFlex_FOXA3_crystal_rep0 |
1VTN |
Prot |
B |
parmBSC1 |
SPCE |
DNA-B Duplex Protein-Nuc SPC/E AddedSalt |
50 |
GACTAAGTCAACCACGC |
|
NAFlex_FOXA3_crystal_rep1 |
1VTN |
Prot |
B |
parmBSC1 |
SPCE |
DNA-B Duplex Protein-Nuc SPC/E AddedSalt |
50 |
GACTAAGTCAACCACGC |
|
NAFlex_FOXA3_crystal_rep2 |
1VTN |
Prot |
B |
parmBSC1 |
SPCE |
DNA-B Duplex Protein-Nuc SPC/E AddedSalt |
50 |
GACTAAGTCAACCACGC |
|
NAFlex_FOXA3_crystal_rep3 |
1VTN |
Prot |
B |
parmBSC1 |
SPCE |
DNA-B Duplex Protein-Nuc SPC/E AddedSalt |
50 |
GACTAAGTCAACCACGC |
|
NAFlex_FOXA3_crystal_rep4 |
1VTN |
Prot |
B |
parmBSC1 |
SPCE |
DNA-B Duplex Protein-Nuc SPC/E AddedSalt |
50 |
GACTAAGTCAACCACGC |
|
NAFlex_FOXA3_crystal_rep5 |
1VTN |
Prot |
B |
parmBSC1 |
SPCE |
DNA-B Duplex Protein-Nuc SPC/E AddedSalt |
50 |
GACTAAGTCAACCACGC |
|
NAFlex_FOXA3_mut_rep0 |
|
Prot |
B |
parmBSC1 |
SPCE |
DNA-B Duplex Protein-Nuc SPC/E AddedSalt |
50 |
GACTATGTAAACAACGC |
|
NAFlex_FOXA3_mut_rep1 |
|
Prot |
B |
parmBSC1 |
SPCE |
DNA-B Duplex Protein-Nuc SPC/E AddedSalt |
50 |
GACTATGTAAACAACGC |
|
NAFlex_FOXA3_mut_rep2 |
|
Prot |
B |
parmBSC1 |
SPCE |
DNA-B Duplex Protein-Nuc SPC/E AddedSalt |
50 |
GACTATGTAAACAACGC |
|
NAFlex_FOXA3_mut_rep3 |
|
Prot |
B |
parmBSC1 |
SPCE |
DNA-B Duplex Protein-Nuc SPC/E AddedSalt |
50 |
GACTATGTAAACAACGC |
|
NAFlex_FOXA3_mut_rep4 |
|
Prot |
B |
parmBSC1 |
SPCE |
DNA-B Duplex Protein-Nuc SPC/E AddedSalt |
50 |
GACTATGTAAACAACGC |
|
NAFlex_FOXA3_mut_rep5 |
|
Prot |
B |
parmBSC1 |
SPCE |
DNA-B Duplex Protein-Nuc SPC/E AddedSalt |
50 |
GACTATGTAAACAACGC |
|
NAFlex_FOXO3_mut_rep0 |
|
Dna |
B |
parmBSC1 |
SPCE |
DNA-B Duplex Protein-Nuc SPC/E AddedSalt |
50 |
GACTAAGTCAACCACGC |
|
NAFlex_FOXO3_mut_rep5 |
|
Dna |
B |
parmBSC1 |
SPCE |
DNA-B Duplex Protein-Nuc SPC/E AddedSalt |
50 |
GACTAAGTCAACCACGC |
|
NAFlex_FOXO3_mut_rep4 |
|
Dna |
B |
parmBSC1 |
SPCE |
DNA-B Duplex Protein-Nuc SPC/E AddedSalt |
50 |
GACTAAGTCAACCACGC |
|
NAFlex_FOXO3_mut_rep3 |
|
Dna |
B |
parmBSC1 |
SPCE |
DNA-B Duplex Protein-Nuc SPC/E AddedSalt |
50 |
GACTAAGTCAACCACGC |
|
NAFlex_FOXO3_mut_rep2 |
|
Dna |
B |
parmBSC1 |
SPCE |
DNA-B Duplex Protein-Nuc SPC/E AddedSalt |
50 |
GACTAAGTCAACCACGC |
|
NAFlex_FOXO3_mut_rep1 |
|
Dna |
B |
parmBSC1 |
SPCE |
DNA-B Duplex Protein-Nuc SPC/E AddedSalt |
50 |
GACTAAGTCAACCACGC |
|
NAFlex_FOXO3_crystal_rep1 |
2UZK |
Dna |
B |
parmBSC1 |
SPCE |
DNA-B Duplex Protein-Nuc SPC/E AddedSalt |
50 |
GACTATGTAAACAACGC |
|
NAFlex_FOXO3_crystal_rep2 |
2UZK |
Dna |
B |
parmBSC1 |
SPCE |
DNA-B Duplex Protein-Nuc SPC/E AddedSalt |
50 |
GACTATGTAAACAACGC |
|
NAFlex_FOXO3_crystal_rep3 |
2UZK |
Dna |
B |
parmBSC1 |
SPCE |
DNA-B Duplex Protein-Nuc SPC/E AddedSalt |
50 |
GACTATGTAAACAACGC |
|
NAFlex_FOXO3_crystal_rep4 |
2UZK |
Dna |
B |
parmBSC1 |
SPCE |
DNA-B Duplex Protein-Nuc SPC/E AddedSalt |
50 |
GACTATGTAAACAACGC |
|
NAFlex_FOXO3_crystal_rep5 |
2UZK |
Dna |
B |
parmBSC1 |
SPCE |
DNA-B Duplex Protein-Nuc SPC/E AddedSalt |
50 |
GACTATGTAAACAACGC |
|
NAFlex_FOXO3_dna_rep0 |
|
Dna |
B |
parmBSC1 |
SPCE |
DNA-B Duplex Naked SPC/E AddedSalt |
50 |
GACTATGTAAACAACGC |
|
NAFlex_FOXO3_dna_rep1 |
|
Dna |
B |
parmBSC1 |
SPCE |
DNA-B Duplex Naked SPC/E AddedSalt |
50 |
GACTATGTAAACAACGC |
|
NAFlex_FOXO3_dna_rep2 |
|
Dna |
B |
parmBSC1 |
SPCE |
DNA-B Duplex Naked SPC/E AddedSalt |
50 |
GACTATGTAAACAACGC |
|
NAFlex_FOXO3_dna_rep3 |
|
Dna |
B |
parmBSC1 |
SPCE |
DNA-B Duplex Naked SPC/E AddedSalt |
50 |
GACTATGTAAACAACGC |
|
NAFlex_FOXO3_dna_rep4 |
|
Dna |
B |
parmBSC1 |
SPCE |
DNA-B Duplex Naked SPC/E AddedSalt |
50 |
GACTATGTAAACAACGC |
|
NAFlex_FOXO3_dna_rep5 |
|
Dna |
B |
parmBSC1 |
SPCE |
DNA-B Duplex Naked SPC/E AddedSalt |
50 |
GACTATGTAAACAACGC |
|
NAFlex_FOXA3_dna_rep3 |
|
Dna |
B |
parmBSC1 |
SPCE |
DNA-B Duplex Naked SPC/E AddedSalt |
50 |
GACTAAGTCAACCACGC |
|
NAFlex_FOXA3_dna_rep4 |
|
Dna |
B |
parmBSC1 |
SPCE |
DNA-B Duplex Naked SPC/E AddedSalt |
50 |
GACTAAGTCAACCACGC |
|
NAFlex_FOXA3_dna_rep0 |
|
Dna |
B |
parmBSC1 |
SPCE |
DNA-B Duplex Naked SPC/E AddedSalt |
50 |
GACTAAGTCAACCACGC |
|
NAFlex_FOXA3_dna_rep1 |
|
Dna |
B |
parmBSC1 |
SPCE |
DNA-B Duplex Naked SPC/E AddedSalt |
50 |
GACTAAGTCAACCACGC |
|
NAFlex_FOXA3_dna_rep2 |
|
Dna |
B |
parmBSC1 |
SPCE |
DNA-B Duplex Naked SPC/E AddedSalt |
50 |
GACTAAGTCAACCACGC |
|
NAFlex_FOXA3_dna_rep5 |
|
Dna |
B |
parmBSC1 |
SPCE |
DNA-B Duplex Naked SPC/E AddedSalt |
50 |
GACTAAGTCAACCACGC |
|
NAFlex_A2B_1 |
1BNA |
Dna |
B |
parmBSC1 |
TIP3P |
DNA-Mixed Duplex Naked ParmBSC1 TIP3P Electroneutral Transition |
40 |
CGCGAATTCGCG |
|
NAFlex_A2B_2 |
1BNA |
Dna |
B |
parmBSC1 |
TIP3P |
DNA-Mixed Duplex Naked ParmBSC1 TIP3P Electroneutral Transition |
40 |
CGCGAATTCGCG |
|
NAFlex_A2B_3 |
1BNA |
Dna |
B |
parmBSC1 |
TIP3P |
DNA-Mixed Duplex Naked ParmBSC1 TIP3P Electroneutral Transition |
40 |
CGCGAATTCGCG |
|
NAFlex_A2B_4 |
1BNA |
Dna |
B |
parmBSC1 |
TIP3P |
DNA-Mixed Duplex Naked ParmBSC1 TIP3P Electroneutral Transition |
40 |
CGCGAATTCGCG |
|
NAFlex_A2B_5 |
1BNA |
Dna |
B |
parmBSC1 |
TIP3P |
DNA-Mixed Duplex Naked ParmBSC1 TIP3P Electroneutral Transition |
40 |
CGCGAATTCGCG |
|
NAFlex_MuG_TRF1 |
1W0T |
Dna |
B |
parmBSC0 |
SPCE |
DNA-B Duplex Complex ParmBSC0 SPC/E |
40 |
TGTTAGGGTTAGGGTTAG |
|
NAFlex_RNA_miniABC_KCl_3 |
|
Rna |
|
parmBSC0+OL3 |
|
|
- |
GCAGAAACAGCUCUGCGC |
|
NAFlex_TEST_HOSP |
|
Rna |
|
parmBSC0+OL3 |
|
|
- |
GCAGAAACAGCUCUGCGC |